Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3701 and Atu3702 are separated by 286 nucleotidesAtu3702 and Atu3703 are separated by 136 nucleotidesAtu3703 and Atu3704 are separated by 252 nucleotidesAtu3704 and Atu3705 are separated by 438 nucleotides Atu3701: Atu3701 - glutathione S-transferase, at 779,833 to 780,525 Atu3701 Atu3702: Atu3702 - tRNA-Met, at 780,812 to 780,888 Atu3702 Atu3703: Atu3703 - tRNA-specific 2-thiouridylase MnmA, at 781,025 to 782,167 Atu3703 Atu3704: Atu3704 - hypothetical protein, at 782,420 to 783,610 Atu3704 Atu3705: Atu3705 - hypothetical protein, at 784,049 to 784,696 Atu3705
Group Condition Atu3701 Atu3702 Atu3703 Atu3704 Atu3705
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.4 N.D. N.D. -0.8 -0.2
stress R2A with Tetracycline 0.002 mM -0.4 N.D. N.D. -0.5 -0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 N.D. N.D. -0.7 -0.3
stress R2A with Tetracycline 0.002 mM +0.1 N.D. N.D. -0.4 -0.4
stress R2A with Azlocillin 0.2 mM -0.6 N.D. N.D. -0.5 +0.4
stress R2A with Calcium Chloride Dihydrate 87.5 mM -0.3 N.D. N.D. -0.4 +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 N.D. N.D. +0.4 -0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 N.D. N.D. +0.4 -0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 -0.2 N.D. N.D. +0.6 -0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 N.D. N.D. -0.6 +0.6
phage AgroPhage_B01 +0.3 N.D. N.D. -0.2 +0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 N.D. N.D. -0.2 +0.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 N.D. N.D. +0.6 -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 +0.3 N.D. N.D. +0.5 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 -0.0 N.D. N.D. +0.6 +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD0.075 +0.2 N.D. N.D. +0.9 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 N.D. N.D. -0.2 +1.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 N.D. N.D. +0.0 +0.7
phage AgroPhage_E04 +0.1 N.D. N.D. +0.2 +0.7
phage phage 100.2 +0.1 N.D. N.D. +0.5 +0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 N.D. N.D. +0.1 +0.8
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 N.D. N.D. +0.3 +0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 +0.0 N.D. N.D. +0.8 +0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.4 N.D. N.D. +0.1 +0.6
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.0 N.D. N.D. +0.9 +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.3 N.D. N.D. +0.2 +0.6
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days +0.2 N.D. N.D. +0.2 +0.7
phage AgroPhage_F10 +0.8 N.D. N.D. +0.2 +0.2
stress R2A with Vancomycin 0.009 mM +0.2 N.D. N.D. +4.7 -0.7
stress R2A with Vancomycin 0.009 mM -0.1 N.D. N.D. +5.2 -0.0
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