Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3681 and Atu3682 overlap by 4 nucleotidesAtu3682 and Atu3683 are separated by 11 nucleotidesAtu3683 and Atu3684 are separated by 4 nucleotidesAtu3684 and Atu3685 are separated by 14 nucleotides Atu3681: Atu3681 - polyketide synthase, at 738,077 to 742,510 Atu3681 Atu3682: Atu3682 - non-ribosomal peptide synthetase, siderophore biosynthesis protein, at 742,507 to 749,706 Atu3682 Atu3683: Atu3683 - peptide synthetase, siderophore biosynthesis protein, at 749,718 to 757,409 Atu3683 Atu3684: Atu3684 - siderophore biosynthesis protein, at 757,414 to 759,081 Atu3684 Atu3685: Atu3685 - thioesterase, siderophore biosynthesis protein, at 759,096 to 759,842 Atu3685
Group Condition Atu3681 Atu3682 Atu3683 Atu3684 Atu3685
stress Pyrogallol 0.5 mM -0.3 -0.3 -0.3 -0.3 -0.5
nitrogen source L-Ornithine (N) -0.3 -0.3 -0.3 -0.3 -0.4
nitrogen source L-Ornithine (N) -0.3 -0.4 -0.3 -0.3 -0.3
nitrogen source 5-Aminolevulinic (N) -0.2 -0.2 -0.2 -0.3 -0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -0.1 -0.1 -0.2 -0.1 -0.5
nitrogen source L-Serine (N) -0.1 -0.2 -0.2 -0.1 -0.4
carbon source m-Inositol (C) -0.2 -0.1 -0.2 -0.2 -0.3
carbon source m-Inositol (C) -0.1 -0.2 -0.2 -0.1 -0.4
carbon source L-Rhamnose (C) -0.1 -0.1 -0.2 -0.3 -0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.1 -0.1 -0.1 -0.2 -0.4
carbon source Methyl alpha-D-glucopyranoside (C) -0.1 -0.2 -0.2 -0.1 -0.4
carbon source Methyl alpha-D-glucopyranoside (C) -0.2 -0.1 -0.1 -0.2 -0.4
carbon source D-Raffinose (C) -0.2 -0.1 -0.1 -0.2 -0.3
nitrogen source L-Pipecolic Acid (N) -0.2 -0.1 -0.2 -0.1 -0.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.2 -0.2 -0.1 -0.2 -0.3
nitrogen source Orotic (N) -0.1 -0.2 -0.2 -0.2 -0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -0.0 -0.2 -0.1 -0.0 -0.6
nitrogen source 6-aminocaproic (N) -0.1 -0.1 -0.2 -0.2 -0.3
nitrogen source L-Lysine (N) -0.1 -0.2 -0.1 -0.2 -0.4
carbon source D-Saccharic potassium salt (C) -0.3 -0.1 -0.2 -0.0 -0.4
carbon source methyl-beta-D-xylopyranoside (C) -0.3 -0.1 -0.1 -0.2 -0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.0 +0.1 +0.3 -0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.1 +0.2 +0.3 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.2 +0.1 +0.1 +0.3 +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.1 +0.3 +0.1 +0.4
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.2 +0.2 +0.3 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.2 +0.1 +0.1 +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.3 +0.3 +0.1 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.1 +0.0 +0.6 +0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.2 +0.1 +0.6 +0.6
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