Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 953 experiments or choose conditions or try the comparative fitness browser

500 ntAtu8034 and Atu3666 are separated by 12 nucleotidesAtu3666 and Atu3667 are separated by 54 nucleotidesAtu3667 and Atu3668 are separated by 31 nucleotidesAtu3668 and Atu3669 are separated by 114 nucleotides Atu8034: Atu8034 - hypothetical protein, at 714,854 to 715,033 Atu8034 Atu3666: Atu3666 - hypothetical protein, at 715,046 to 715,504 Atu3666 Atu3667: Atu3667 - aspartate alpha-decarboxylase, at 715,559 to 716,026 Atu3667 Atu3668: Atu3668 - siderophore biosynthesis protein, at 716,058 to 716,579 Atu3668 Atu3669: Atu3669 - siderophore biosynthesis protein, at 716,694 to 718,055 Atu3669
Group Condition Atu8034 Atu3666 Atu3667 Atu3668 Atu3669
nitrogen source L-Ornithine (N) -0.8 -0.4 -0.4 -0.6 -0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.2 -0.3 -0.3 -0.3 -0.4
nitrogen source L-Ornithine (N) -1.0 -0.2 -0.4 -0.2 -0.5
nitrogen source L-Arginine (N) -0.9 -0.3 -0.3 -0.5 -0.3
stress R2A with hypochlorite 6.25 mM -0.5 -0.5 -0.2 -0.8 -0.2
carbon source D-Saccharic potassium salt (C) -0.6 -0.0 -0.6 -0.8 -0.2
carbon source L-Xylose (C) -0.3 -0.4 -0.5 -0.9 -0.2
nitrogen source DL-2-Aminobutyric (N) -0.5 -0.6 -0.7 +0.3 +0.1
stress Pyrogallol 0.5 mM -0.7 +0.4 -0.2 -0.4 -0.5
phage AgroPhage_E04 +0.6 +0.4 +0.1 -1.8 -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.0 -0.5 +1.0 -0.9 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.8 +0.2 -0.7 -0.5 -0.2
phage AgroPhage_E10 -0.7 +0.6 -0.0 +0.7 -0.8
phage AgroPhage_F04 -0.9 +0.4 +0.1 -0.3 +0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.0 +0.6 -1.1 +0.3
phage AgroPhage_C04 +0.5 -0.3 +0.7 -0.8 +0.0
phage AgroPhage_D10 -0.6 -0.3 +0.6 +0.6 +0.2
in planta Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 +0.2 +0.5 -0.6 -0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 -0.4 +0.6 +0.5 +0.5
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.9 -0.5 -0.1 +0.6 +0.3
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +1.0 +0.5 +0.3 -0.6 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.0 -0.3 +0.4 +0.2 +0.4
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.7 +0.1 +0.7 -0.3 +0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.4 +0.4 +1.3 -0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.7 +1.1 -0.2 +0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.2 -0.5 +0.4 +0.6 +0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.8 -0.1 +0.5 +0.5 +0.4
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +1.4 +0.4 +0.2 +0.2 -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.5 +0.6 +0.5 +0.3
nophagecontrol No phage control +0.6 +0.4 +0.7 +0.6 +0.2
remove
Atu8034
plot		 remove
Atu3666
plot		 remove
Atu3667		 remove
Atu3668
plot		 remove
Atu3669
plot