Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu3652	Atu3653	Atu3654	Atu3655	Atu3656
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.3	-0.2	+0.3	-0.9	-0.4
in planta	Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.6	+0.4	-0.3	-0.0	-0.2
in planta	Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days	-0.0	-0.7	+0.3	-0.5	+0.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.4	-0.8	+0.1	+0.2	-0.3
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.2	-0.8	+0.2	+0.3	-0.1
phage	AgroPhage_C10	-0.5	+0.6	+0.0	-0.3	-0.0
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.2	+0.6	+0.1	-0.4	-0.4
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.3	+0.3	+0.4	-0.2	+0.5
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.0	+0.9	+0.3	+0.2	-0.5
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.2	+1.1	+0.1	-0.3	+0.3
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.2	+0.9	+0.2	-0.2	-0.1
carbon source	D-Arabinose (C)	+0.3	-0.3	+0.4	+0.4	+0.2
carbon source	D-Glucosamine Hydrochloride (C)	+0.3	-0.4	+0.4	+0.5	+0.3
carbon source	Xylitol (C)	+0.2	+0.0	+0.5	+0.4	+0.3
carbon source	2-Keto-D-gluconic hemicalcium salt (C)	+0.3	+0.2	+0.3	+0.3	+0.3
stress	R2A with EDTA 0.25 mM	+0.4	+0.4	+0.1	+0.3	+0.3
carbon source	D-Leucrose (C)	+0.2	+0.3	+0.3	+0.4	+0.3
nitrogen source	L-Histidine (N)	+0.3	+0.5	+0.3	+0.4	+0.1
carbon source	Methyl alpha-D-glucopyranoside (C)	+0.4	+0.1	+0.2	+0.4	+0.4
carbon source	D-Trehalose (C)	+0.3	+0.1	+0.4	+0.5	+0.2
carbon source	L-Rhamnose (C)	+0.3	+0.2	+0.4	+0.5	+0.2
carbon source	L-ascorbate (C)	+0.3	+0.2	+0.3	+0.6	+0.2
carbon source	D-Fructose (C)	+0.2	+0.4	+0.2	+0.4	+0.3
carbon source	D-Galacturonic Acid (C)	+0.3	+0.2	+0.4	+0.4	+0.4
carbon source	D-Glucosamine Hydrochloride (C)	+0.3	+0.3	+0.3	+0.4	+0.4
carbon source	D-(-)-lyxose (C)	+0.4	+0.3	+0.3	+0.5	+0.3
carbon source	D-Galacturonic Acid (C)	+0.4	+0.1	+0.4	+0.4	+0.4
carbon source	palatinose (C)	+0.2	+0.4	+0.4	+0.5	+0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.2	+1.4	-0.1	+0.3	+0.1
nitrogen source	DL-2-Aminobutyric (N)	+0.6	+1.4	+0.7	+0.6	+0.3