Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3637 and Atu3638 are separated by 258 nucleotidesAtu3638 and Atu3639 are separated by 3 nucleotidesAtu3639 and Atu3640 are separated by 2 nucleotidesAtu3640 and Atu3641 overlap by 4 nucleotides Atu3637: Atu3637 - 30S ribosomal protein S21, at 689,890 to 690,120 Atu3637 Atu3638: Atu3638 - hypothetical protein, at 690,379 to 691,503 Atu3638 Atu3639: Atu3639 - hypothetical protein, at 691,507 to 692,238 Atu3639 Atu3640: Atu3640 - hypothetical protein, at 692,241 to 693,821 Atu3640 Atu3641: Atu3641 - hypothetical protein, at 693,818 to 694,927 Atu3641
Group Condition Atu3637 Atu3638 Atu3639 Atu3640 Atu3641
stress R2A with tungstate 375 mM N.D. -0.4 N.D. -0.1 -0.3
phage phage 99.2 N.D. -0.2 N.D. -0.2 -0.3
phage Phage 95.3 + bacteria N.D. -0.2 N.D. -0.3 -0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days N.D. -0.2 N.D. -0.2 -0.3
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.4 N.D. -0.1 -0.2
phage AgroPhage_F04 N.D. -0.2 N.D. +0.1 -0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.2 N.D. -0.3 -0.2
Atjh14 N.D. -0.5 N.D. -0.3 +0.1
phage AgroPhage_A07 N.D. +0.1 N.D. -0.5 -0.1
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.4 N.D. -0.3 +0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.4 N.D. +0.2 -0.1
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.0 N.D. +0.3 -0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. +0.2 N.D. +0.3 -0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.2 N.D. +0.3 +0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus N.D. +0.1 N.D. -0.2 +0.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant N.D. -0.1 N.D. +0.4 +0.2
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -0.0 N.D. +0.1 +0.6
carbon source L-Fucose (C) N.D. +0.2 N.D. +0.3 +0.2
carbon source Methyl alpha-D-glucopyranoside (C) N.D. +0.0 N.D. +0.3 +0.3
in planta Bethi_Library_OD1.0 N.D. +0.4 N.D. +0.1 +0.2
stress Hygromycin B 25 ug/mL N.D. +0.2 N.D. +0.2 +0.3
nitrogen source D-Alanine (N) N.D. +0.2 N.D. +0.2 +0.3
stress Erythromycin 6.25 ug/mL N.D. +0.2 N.D. +0.1 +0.4
carbon source NAG (C) N.D. +0.1 N.D. +0.3 +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. +0.2 N.D. +0.2 +0.4
stress R2A with sodium fluoride 0.2 mM N.D. +0.3 N.D. +0.3 +0.2
stress R2A with silver chloride 5 mM N.D. +0.2 N.D. +0.3 +0.3
nitrogen source DL-2-Aminobutyric (N) N.D. +0.3 N.D. +0.2 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.4 N.D. +0.2 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. +0.2 N.D. +0.5 +0.3
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