Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3628 and Atu3629 overlap by 4 nucleotidesAtu3629 and Atu3630 are separated by 63 nucleotidesAtu3630 and Atu3631 are separated by 452 nucleotidesAtu3631 and Atu3632 overlap by 4 nucleotides Atu3628: Atu3628 - hypothetical protein, at 680,564 to 680,737 Atu3628 Atu3629: Atu3629 - site-specific tyrosine recombinase XerD, at 680,734 to 681,729 Atu3629 Atu3630: Atu3630 - acetyl-CoA carboxylase carboxyltransferase subunit alpha, at 681,793 to 682,746 Atu3630 Atu3631: Atu3631 - hypothetical protein, at 683,199 to 684,338 Atu3631 Atu3632: Atu3632 - hypothetical protein, at 684,335 to 684,571 Atu3632
Group Condition Atu3628 Atu3629 Atu3630 Atu3631 Atu3632
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.8 N.D. N.D. -0.5 -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 N.D. N.D. -1.0 -0.8
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.1 N.D. N.D. -0.0 -0.7
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 N.D. N.D. -0.6 -0.5
stress methyl jasmonate 5 mM -0.9 N.D. N.D. -0.8 +0.0
stress Erythromycin 12.5 ug/mL -0.6 N.D. N.D. -1.0 +0.2
stress Erythromycin 6.25 ug/mL -0.7 N.D. N.D. -0.8 +0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.6 N.D. N.D. -0.2 +0.3
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.9 N.D. N.D. -0.2 -0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.1 N.D. N.D. +0.2 -0.4
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.9 N.D. N.D. -0.6 +0.4
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 N.D. N.D. -0.7 +0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.8 N.D. N.D. +0.5 -0.5
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.1 N.D. N.D. -0.1 +0.5
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.1 N.D. N.D. +0.3 +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.3 N.D. N.D. -0.1 +1.0
lb LB -0.8 N.D. N.D. -0.1 +0.7
phage AgroPhage_F04 +0.6 N.D. N.D. +0.5 -1.1
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 N.D. N.D. +0.6 +0.2
Atjh15 +1.0 N.D. N.D. -0.8 +0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 N.D. N.D. -0.1 +1.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.7 N.D. N.D. +0.2 +1.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 N.D. N.D. +1.0 -0.3
Atjh14 +0.3 N.D. N.D. +0.8 -0.3
phage AgroPhage_E04 +1.0 N.D. N.D. +0.3 -0.2
stress R2A with Vancomycin 0.009 mM +1.3 N.D. N.D. +0.0 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 N.D. N.D. +0.6 +1.0
carbon source sarcosine (C) +1.2 N.D. N.D. +0.2 +0.2
carbon source 4-Hydroxybenzoic Acid (C) +0.7 N.D. N.D. +0.6 +0.4
phage AgroPhage_E10 +1.1 N.D. N.D. +0.1 +0.7
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