Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3622 and Atu3623 are separated by 68 nucleotidesAtu3623 and Atu3624 are separated by 114 nucleotidesAtu3624 and Atu3625 are separated by 19 nucleotidesAtu3625 and Atu3626 are separated by 5 nucleotides Atu3622: Atu3622 - cobalamin biosynthesis protein, at 676,547 to 677,536 Atu3622 Atu3623: Atu3623 - DnaJ family molecular chaperone, at 677,605 to 678,240 Atu3623 Atu3624: Atu3624 - stress induced morphogen, at 678,355 to 678,636 Atu3624 Atu3625: Atu3625 - 3-dehydroquinate synthase, at 678,656 to 679,789 Atu3625 Atu3626: Atu3626 - shikimate kinase, at 679,795 to 680,376 Atu3626
Group Condition Atu3622 Atu3623 Atu3624 Atu3625 Atu3626
stress R2A with Rifampicin 0.0007 mM N.D. -5.7 +0.1 N.D. N.D.
carbon source DL-glyceraldehyde (C) N.D. -4.1 -0.0 N.D. N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -2.8 -0.7 N.D. N.D.
carbon source DL-glyceraldehyde (C) N.D. -3.6 +0.1 N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -2.4 -0.5 N.D. N.D.
carbon source L-Sorbose (C) N.D. -1.4 -1.3 N.D. N.D.
carbon source L-Sorbose (C) N.D. -1.2 -1.2 N.D. N.D.
stress R2A with Rifampicin 0.0007 mM N.D. -2.3 +0.2 N.D. N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -1.9 -0.2 N.D. N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -2.0 -0.0 N.D. N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -1.9 +0.1 N.D. N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -1.1 -0.4 N.D. N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -1.5 +0.0 N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -1.4 +0.0 N.D. N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -1.2 -0.2 N.D. N.D.
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -1.3 +0.0 N.D. N.D.
carbon source D-Xylose (C) N.D. -0.9 -0.4 N.D. N.D.
phage AgroPhage_D10 N.D. -0.8 -0.4 N.D. N.D.
carbon source D-Glucose (C) N.D. -0.8 -0.4 N.D. N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -1.3 +0.1 N.D. N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days N.D. -0.4 -0.7 N.D. N.D.
stress R2A with Chlorite 0.2 mM N.D. -1.2 +0.0 N.D. N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.8 -0.3 N.D. N.D.
carbon source L-Alanine (C) N.D. -0.8 -0.3 N.D. N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.9 +0.5 N.D. N.D.
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct N.D. -0.7 +0.6 N.D. N.D.
carbon source D-Galacturonic Acid (C) N.D. +0.9 -0.3 N.D. N.D.
carbon source D-(-)-lyxose (C) N.D. +1.1 +0.1 N.D. N.D.
carbon source L-ascorbate (C) N.D. +3.4 -0.1 N.D. N.D.
carbon source L-ascorbate (C) N.D. +3.6 -0.1 N.D. N.D.
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