Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu3616	Atu3617	Atu3618	Atu3619	Atu3620
carbon source	L-ascorbate (C)	-3.8	N.D.	+0.1	+0.5	+0.4
stress	R2A with Ceftazidime 4 mM	-2.6	N.D.	+0.1	-0.0	-0.1
carbon source	L-ascorbate (C)	-2.9	N.D.	+0.0	+0.0	+0.2
phage	AgroPhage_C04	+0.3	N.D.	-0.5	-2.1	-0.2
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.6	N.D.	-0.4	-1.1	-0.3
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.4	N.D.	-0.1	-1.4	-0.3
stress	R2A with Ceftazidime 4 mM	-2.2	N.D.	+0.1	-0.0	+0.0
	Atjh10	-0.2	N.D.	-0.6	-1.1	-0.2
stress	Timentin 6.25 ug/mL	-0.9	N.D.	-0.4	-0.5	-0.0
in planta	Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.5	N.D.	-0.2	-0.8	-0.2
	Atjh10	-0.5	N.D.	-0.3	-0.4	-0.5
stress	Chloramphenicol 12.5 ug/mL	-0.6	N.D.	-0.8	-0.3	+0.1
phage	AgroPhage_A07	+0.3	N.D.	+0.1	-1.7	-0.1
no phage	P2L5	-0.2	N.D.	-0.2	-1.0	+0.2
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.2	N.D.	-0.3	-1.1	+0.4
stress	Erythromycin 12.5 ug/mL	-0.9	N.D.	-0.2	+0.7	-0.1
in planta	Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.4	N.D.	+0.3	-0.8	-0.3
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.5	N.D.	-0.1	+1.1	-0.2
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.5	N.D.	+0.4	+0.1	-0.6
phage	AgroPhage_E10	-0.7	N.D.	-0.1	+1.4	-0.2
phage	AgroPhage_E04	-0.4	N.D.	-0.3	+1.4	-0.0
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.2	N.D.	-0.3	+1.4	+0.0
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.2	N.D.	+0.3	+1.1	+0.2
carbon source	D-Saccharic potassium salt (C)	-0.0	N.D.	+0.3	+0.8	+0.4
phage	AgroPhage_C10	+0.1	N.D.	-0.0	+1.0	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.2	N.D.	+0.1	+1.5	+0.1
phage	AgroPhage_D04	-0.0	N.D.	+0.2	+0.9	+0.8
stress	syringaldehyde 0.5 mM	+0.4	N.D.	+0.2	+0.8	+0.4
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.1	N.D.	+0.5	+1.4	-0.1
nitrogen source	DL-2-Aminobutyric (N)	+0.4	N.D.	+1.0	+2.2	-0.2