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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Atu3600 and Atu3601 are separated by 13 nucleotides
Atu3601 and Atu3602 are separated by 166 nucleotides
Atu3602 and Atu8114 are separated by 184 nucleotides
Atu8114 and Atu3603 are separated by 117 nucleotides
Atu3600: Atu3600 - hypothetical protein, at 654,497 to 654,808
Atu3600
Atu3601: Atu3601 - diaminopimelate decarboxylase, at 654,822 to 656,090
Atu3601
Atu3602: Atu3602 - hypothetical protein, at 656,257 to 658,965
Atu3602
Atu8114: Atu8114 - hypothetical protein, at 659,150 to 659,356
Atu8114
Atu3603: Atu3603 - two component response regulator, at 659,474 to 659,833
Atu3603
Group
Condition
Atu3600
Atu3601
Atu3602
Atu8114
Atu3603
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
N.D.
N.D.
N.D.
N.D.
-2.8
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
N.D.
N.D.
N.D.
N.D.
-2.4
in planta
Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
N.D.
N.D.
N.D.
N.D.
-2.3
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
N.D.
N.D.
N.D.
N.D.
-2.0
in planta
Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
N.D.
N.D.
N.D.
N.D.
-1.7
in planta
Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
N.D.
N.D.
N.D.
N.D.
-1.5
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
N.D.
N.D.
N.D.
N.D.
-1.4
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
N.D.
N.D.
N.D.
N.D.
-1.4
in planta
Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
N.D.
N.D.
N.D.
N.D.
-1.4
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
N.D.
N.D.
N.D.
N.D.
-1.4
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
N.D.
N.D.
N.D.
N.D.
-1.2
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
N.D.
N.D.
N.D.
N.D.
-1.2
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
N.D.
N.D.
N.D.
N.D.
-1.1
nitrogen source
DL-2-Aminobutyric (N)
N.D.
N.D.
N.D.
N.D.
-1.1
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
N.D.
N.D.
N.D.
N.D.
-1.1
in planta
Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
N.D.
N.D.
N.D.
N.D.
-1.1
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days
N.D.
N.D.
N.D.
N.D.
-1.1
stress
R2A with Strontium chloride 750 mM
N.D.
N.D.
N.D.
N.D.
-1.1
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
N.D.
N.D.
N.D.
N.D.
-1.0
in planta
Bethi_Library_OD0.05
N.D.
N.D.
N.D.
N.D.
-1.0
stress
R2A with Manganese (II) chloride tetrahydrate 5 mM
N.D.
N.D.
N.D.
N.D.
+1.1
stress
Chloramphenicol 12.5 ug/mL
N.D.
N.D.
N.D.
N.D.
+1.1
stress
R2A with Tetracycline 0.002 mM
N.D.
N.D.
N.D.
N.D.
+1.1
stress
R2A with nitrite 9 mM
N.D.
N.D.
N.D.
N.D.
+1.2
phage
phage 95.1
N.D.
N.D.
N.D.
N.D.
+1.2
stress
R2A with bromate 5 mM
N.D.
N.D.
N.D.
N.D.
+1.2
stress
R2A with Nalidixic 0.02 mM
N.D.
N.D.
N.D.
N.D.
+1.4
in planta
Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
N.D.
N.D.
N.D.
N.D.
+1.4
stress
R2A with Vancomycin 0.009 mM
N.D.
N.D.
N.D.
N.D.
+1.7
phage
AgroPhage_C04
N.D.
N.D.
N.D.
N.D.
+1.8
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