Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3583 and Atu8189 are separated by 34 nucleotidesAtu8189 and Atu3585 are separated by 125 nucleotidesAtu3585 and Atu3586 are separated by 103 nucleotidesAtu3586 and Atu3587 are separated by 118 nucleotides Atu3583: Atu3583 - hypothetical protein, at 639,224 to 639,784 Atu3583 Atu8189: Atu8189 - hypothetical protein, at 639,819 to 640,196 Atu8189 Atu3585: Atu3585 - glutathione S-transferase, at 640,322 to 641,218 Atu3585 Atu3586: Atu3586 - propionyl-CoA carboxylase, at 641,322 to 642,854 Atu3586 Atu3587: Atu3587 - transcriptional regulator, at 642,973 to 644,391 Atu3587
Group Condition Atu3583 Atu8189 Atu3585 Atu3586 Atu3587
carbon source Propan-1-ol (C) -2.5 -1.6 -2.5 -2.5 -2.2
carbon source Propan-1-ol (C) -2.2 -1.6 -2.4 -1.7 -1.6
phage AgroPhage_C04 +0.5 -1.0 -0.8 -0.6 -0.0
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -1.2 -0.3 -0.1 -0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.7 -0.5 -0.5 +0.0 -0.1
phage AgroPhage_F04 -1.4 -0.3 -0.1 +0.2 -0.1
phage AgroPhage_D04 -0.0 -0.8 -0.1 -0.3 -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.1 -0.4 +0.3 +0.0 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 -0.6 +0.5 -0.5 +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.7 -0.2 -0.3 -0.1
stress R2A with Nitrofurantoin 0.4 mg/mL -0.1 +0.4 -1.0 -0.2 +0.1
stress R2A with Nitrofurantoin 0.4 mg/mL -0.6 +0.5 -0.6 +0.0 +0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.6 -0.6 -0.1 -0.0
phage AgroPhage_H04 +0.2 -0.8 +0.1 +0.3 -0.3
phage AgroPhage_D10 +0.5 -0.3 -0.1 -0.5 -0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.1 +0.5 +0.3 -0.3
stress R2A with m-arsenite 0.8 mM -0.6 +0.4 +0.3 +0.2 -0.2
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.7 +0.6 +0.4 +0.2 -0.3
stress R2A with Vancomycin 0.009 mM -0.7 +0.1 +0.2 +0.5 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7 +0.2 -0.0 +0.3 +0.5
phage AgroPhage_E04 +0.3 -0.7 +0.7 -0.2 +0.3
no phage P1L4 -0.0 +0.6 +0.3 -0.5 +0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +1.0 -0.8 -0.1 +0.6 -0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.5 -0.2 +0.1 -0.6 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.6 -0.3 +0.5 +0.1 +0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.8 +0.3 -0.2 +0.3 -0.0
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.8 +0.2 -0.0 +0.3 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.8 +0.4 +0.1 +0.2 +0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 -0.2 +0.0 +0.6 +0.7
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +2.2 +1.6 -0.1 -0.3 +0.3
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