Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3563 and Atu3564 are separated by 271 nucleotidesAtu3564 and Atu3565 are separated by 77 nucleotidesAtu3565 and Atu3566 are separated by 393 nucleotidesAtu3566 and Atu3567 are separated by 69 nucleotides Atu3563: Atu3563 - transcription elongation factor regulatory protein, at 616,296 to 616,778 Atu3563 Atu3564: Atu3564 - endo-1,3-1,4-beta-glycanase, at 617,050 to 618,447 Atu3564 Atu3565: Atu3565 - hypothetical protein, at 618,525 to 619,505 Atu3565 Atu3566: Atu3566 - hypothetical protein, at 619,899 to 620,321 Atu3566 Atu3567: Atu3567 - hypothetical protein, at 620,391 to 620,882 Atu3567
Group Condition Atu3563 Atu3564 Atu3565 Atu3566 Atu3567
Atjh14 -0.2 -0.5 -0.3 -1.4 -0.2
phage phage 95.1 -0.0 -0.0 -0.3 -0.9 -0.3
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.1 -0.1 -0.8 -0.5
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.2 -0.5 +0.3 -0.5
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 +0.1 -0.2 -0.7 +0.4
Atjh10 -0.1 +0.0 -0.3 -0.8 +0.4
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.1 -0.1 -0.2 -0.9
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 +0.0 -0.2 -0.4 +0.5
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.3 -0.2 -0.2 -0.9
stress Chloramphenicol 12.5 ug/mL +0.2 +0.1 +0.2 -1.0 +0.1
stress R2A with Vancomycin 0.009 mM +0.5 -0.4 +0.0 -0.5 -0.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 +0.1 +0.2 -0.7 -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.0 +0.7 -0.1 -0.6
stress Erythromycin 12.5 ug/mL +0.2 +0.0 +0.6 -0.3 -0.7
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.0 +0.1 +0.3 -1.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 +0.5 +0.5 -0.0 -0.4
phage AgroPhage_E10 +0.5 +0.2 -0.1 -0.9 +0.3
stress R2A with tungstate 375 mM -0.4 +0.0 +0.3 -0.6 +0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.2 +0.0 +0.2 -0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 +0.2 -0.3 +0.5 -0.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.2 +0.4 -0.3 -0.6
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.2 +0.3 -0.4 -0.5
Atjh15 -0.0 -0.0 -0.5 -0.3 +0.9
Atjh10 -0.2 -0.1 -0.5 +0.3 +0.6
nophagecontrol No phage control -0.3 -0.2 -0.1 +0.5 +0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.1 +0.1 +1.1 -0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 +0.1 +0.3 +0.7 -0.5
stress R2A with Tetracycline 0.002 mM -0.4 +0.2 +0.3 +0.6 -0.1
nitrogen source DL-2-Aminobutyric (N) +0.4 +0.8 -0.1 +0.7 -0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.2 +0.2 +1.4 +1.0
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