Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu3558	Atu3559	Atu3560	Atu3561	Atu3562
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.6	-0.3	+0.2	-1.3	-0.2
phage	AgroPhage_H04	-0.4	-0.3	-0.3	+0.1	-1.0
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.1	-0.0	-0.4	-0.3	-0.7
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.7	-0.3	+0.2	-0.2	-0.4
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.1	-0.2	-0.5	-0.6	+0.3
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.2	-0.3	-0.4	-0.4	-0.2
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.1	-0.0	-1.1	-0.4	+0.5
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	-0.8	+0.2	-0.8	+0.4
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.5	-0.2	-0.3	-0.3	+0.6
phage	AgroPhage_E04	-0.3	+0.6	+0.2	-0.2	-0.9
nitrogen source	3-aminobutyric (N)	+0.1	-0.2	+0.1	-0.8	+0.3
phage	AgroPhage_C04	-0.1	+0.0	-0.2	+0.7	-0.7
in planta	Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	-0.0	-0.6	-0.3	+0.6
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.6	-0.4	-0.3	+0.2	-0.2
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.1	+0.0	-0.2	-0.8	+1.0
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.2	-0.5	+0.4	-0.7	+0.5
nitrogen source	DL-2-Aminobutyric (N)	+0.4	+0.1	+0.5	-0.9	-0.1
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.0	+0.1	-0.1	-0.6	+0.7
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.2	-0.2	+0.6	-0.1	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.5	-0.3	+0.1	+0.1	+1.2
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.8	+0.1	+0.0	-0.8	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.0	-0.0	+0.5	-0.7	+0.9
in planta	Plant=Cucumber; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.3	+0.1	+0.4	+0.8	-0.1
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.2	-0.2	+0.6	+0.6	+0.1
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.2	+0.4	-0.1	-0.1	+0.9
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.7	+0.4	-0.6	+0.1	+0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	+0.2	+0.2	+0.4	-0.0	+0.6
stress	R2A with Cobalt chloride 0.02 mM	+0.4	+0.0	+0.0	+0.3	+0.7
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.2	+0.1	+0.6	+1.0	-0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.2	+0.4	+0.5	+1.4	+1.2