Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3545 and Atu3546 are separated by 228 nucleotidesAtu3546 and Atu3547 are separated by 69 nucleotidesAtu3547 and Atu3548 are separated by 144 nucleotidesAtu3548 and Atu3549 overlap by 4 nucleotides Atu3545: Atu3545 - hypothetical protein, at 594,315 to 594,644 Atu3545 Atu3546: Atu3546 - hypothetical protein, at 594,873 to 596,891 Atu3546 Atu3547: Atu3547 - hypothetical protein, at 596,961 to 597,617 Atu3547 Atu3548: Atu3548 - glycosyltransferase, at 597,762 to 598,988 Atu3548 Atu3549: Atu3549 - hypothetical protein, at 598,985 to 600,322 Atu3549
Group Condition Atu3545 Atu3546 Atu3547 Atu3548 Atu3549
phage AgroPhage_C10 -0.0 -0.4 -0.3 -0.6 -0.1
phage AgroPhage_D04 -0.3 -0.4 -0.3 -0.1 -0.1
phage AgroPhage_C04 -0.7 -0.3 +0.1 -0.0 -0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.9 -0.2 +0.3 -0.1 -0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.2 -0.4 -0.3 +0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 -0.0 +0.2 -0.6 +0.1
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 +0.0 -0.1 -0.6 +0.3
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.8 -0.1 -0.2 +0.2 +0.2
phage AgroPhage_H04 +0.3 -0.2 +0.0 -0.7 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.3 -0.1 +0.2 -0.9 -0.0
phage AgroPhage_E10 +0.4 -0.0 -0.2 -0.6 -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -0.0 +0.3 -0.8 -0.3
stress Chloramphenicol 12.5 ug/mL +0.6 +0.0 -0.2 -0.2 -0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.2 -0.5 +0.2 +0.2
phage AgroPhage_H10 +0.5 -0.4 +0.2 -0.3 +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.3 -0.1 +0.2 -0.6 +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.4 -0.0 +0.2 -0.7 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.0 +0.6 -0.9 +0.2
phage AgroPhage_F10 +0.5 +0.0 +0.3 -0.3 -0.3
Atjh14 +0.9 +0.1 -0.2 -0.4 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.9 +0.5 -0.0 -0.2 -0.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.8 +0.0 +0.3 -0.4 +0.1
no phage P2L5 +0.9 -0.3 +0.2 +0.1 +0.0
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.5 +0.1 +0.4 -0.2 +0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.6 +0.0 -0.2 +0.4 +0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 -0.0 +0.3 +0.0 +0.4
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.3 +0.1 -0.0 +0.1 -0.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.8 +0.2 +0.1 +0.3 +0.1
Atjh15 +0.9 -0.0 +0.2 +0.7 -0.1
carbon source D-Saccharic potassium salt (C) +1.9 +0.1 -0.1 +0.1 -0.1
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