Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu3539	Atu3540	Atu3541	Atu3542	Atu3543
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-1.1	-0.1	-0.3	N.D.	-0.7
phage	AgroPhage_E10	-0.6	+0.2	-0.8	N.D.	-0.7
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.2	-0.3	-0.9	N.D.	-0.1
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.8	+0.0	-0.4	N.D.	-0.2
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.3	-0.4	-0.6	N.D.	+0.0
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.5	-0.4	-0.3	N.D.	+0.0
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.6	-0.1	-0.2	N.D.	-0.2
phage	Phage 100.2 + bactiera	-0.5	-0.0	-0.6	N.D.	+0.0
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-1.0	+0.2	-0.3	N.D.	+0.0
in planta	Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.7	-0.3	+0.1	N.D.	+0.0
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.8	+0.2	-0.0	N.D.	-0.1
phage	AgroPhage_F04	-0.5	-0.2	+0.3	N.D.	-0.3
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.4	-0.3	-0.5	N.D.	+0.0
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.2	+0.5	-0.4	N.D.	-0.2
phage	AgroPhage_C10	-0.6	+0.3	+0.5	N.D.	-0.4
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.4	-0.2	+0.2	N.D.	+0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.5	-0.1	-0.3	N.D.	-0.2
in planta	Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.7	-0.2	-0.5	N.D.	+0.1
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.9	-0.2	-0.8	N.D.	+0.3
phage	AgroPhage_F10	+0.4	-0.2	+0.3	N.D.	-0.3
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.7	-0.4	-0.2	N.D.	+0.3
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.8	-0.6	-0.2	N.D.	+0.4
stress	R2A with Vancomycin 0.009 mM	+0.8	+0.0	-0.4	N.D.	-0.0
phage	AgroPhage_D10	+0.3	+0.1	+0.4	N.D.	-0.3
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.8	+0.2	-0.3	N.D.	-0.0
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.2	+0.7	-0.0	N.D.	+0.2
pH	R2A pH 5.5	+0.2	+0.4	+0.5	N.D.	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.1	+0.3	+0.5	N.D.	+0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.3	+0.6	+0.4	N.D.	+0.1
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.6	+0.5	+0.6	N.D.	+0.3