Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu3528	Atu3529	Atu3530	Atu3531	Atu3532
phage	AgroPhage_C04	-0.7	-0.2	-0.0	-0.2	-0.8
carbon source	D-(-)-lyxose (C)	-0.3	-0.3	-0.5	-0.6	-0.1
carbon source	L-Fucose (C)	-0.4	-0.2	-0.1	-0.3	-0.7
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.1	-0.5	-0.3	+0.5	-1.2
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.3	+0.1	+0.6	-0.5	-1.4
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.2	-0.3	-0.4	-1.0
carbon source	Methyl alpha-D-glucopyranoside (C)	+0.2	-0.2	-0.1	-0.2	-0.9
stress	R2A with m-arsenite 0.8 mM	+0.1	+0.2	+0.0	+0.2	-1.5
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.7	+0.5	+0.0	-0.6	-0.1
in planta	Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.4	-0.1	-0.5	-0.3	+0.5
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.2	-0.2	+0.4	-0.0	-0.7
stress	R2A with m-arsenite 0.8 mM	-0.2	+0.5	+0.2	-0.2	-0.9
carbon source	D-Saccharic potassium salt (C)	+0.2	+0.2	+0.2	+0.3	-1.4
stress	R2A with tungstate 375 mM	-0.0	-0.8	-0.3	+0.2	+0.6
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.2	+0.4	+0.2	-0.5	-0.2
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.0	+0.5	+0.2	+0.6	-0.9
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.0	+0.1	+0.2	+0.8	-0.7
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.3	+0.2	+0.5	+0.5	-0.2
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.2	-0.4	+0.4	+0.3	+0.5
phage	AgroPhage_F10	+0.5	+0.8	+0.2	-0.2	-0.3
stress	Chloramphenicol 12.5 ug/mL	+0.3	-0.5	+0.1	+0.3	+0.6
stress	R2A with molybdate 400 mM	+0.2	-0.3	+0.2	-0.2	+1.0
carbon source	Xylitol (C)	-0.4	-0.0	+0.2	-0.1	+1.5
carbon source	Xylitol (C)	+0.1	+0.2	+0.1	-0.1	+1.2
carbon source	D-Ribose (C)	+0.1	-0.4	+0.1	+0.0	+2.2
carbon source	D-Ribose (C)	+0.0	-0.1	+0.2	+0.0	+2.2
carbon source	L-ascorbate (C)	-0.0	+0.1	+0.0	+0.0	+2.4
carbon source	L-Sorbose (C)	-0.0	-0.2	+0.2	-0.1	+2.7
carbon source	L-ascorbate (C)	-0.0	+0.1	+0.1	+0.1	+2.4
carbon source	L-Sorbose (C)	+0.1	-0.1	+0.1	+0.1	+2.9