Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3517 and Atu3518 are separated by 18 nucleotidesAtu3518 and Atu3519 are separated by 92 nucleotidesAtu3519 and Atu3520 are separated by 242 nucleotidesAtu3520 and Atu3521 are separated by 147 nucleotides Atu3517: Atu3517 - acetyltransferase, at 564,019 to 564,795 Atu3517 Atu3518: Atu3518 - bifunctional ornithine acetyltransferase/N-acetylglutamate synthase, at 564,814 to 566,055 Atu3518 Atu3519: Atu3519 - peptidyl-prolyl cis-trans isomerase, at 566,148 to 567,014 Atu3519 Atu3520: Atu3520 - preprotein translocase subunit SecA, at 567,257 to 569,965 Atu3520 Atu3521: Atu3521 - permease, at 570,113 to 571,006 Atu3521
Group Condition Atu3517 Atu3518 Atu3519 Atu3520 Atu3521
stress R2A with Vancomycin 0.009 mM -2.7 -3.5 -1.1 N.D. +0.5
stress R2A with Vancomycin 0.009 mM -2.7 -2.6 -0.6 N.D. -0.0
stress R2A with Calcium Chloride Dihydrate 87.5 mM -1.4 -1.8 -1.3 N.D. +0.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.9 -0.8 -0.5 N.D. -0.5
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.4 -1.1 -1.0 N.D. -0.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -2.0 -0.3 -0.8 N.D. -0.6
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.8 -0.7 -0.7 N.D. -0.3
stress methyl jasmonate 5 mM -1.0 -0.8 -1.6 N.D. +0.1
stress R2A with Calcium Chloride Dihydrate 87.5 mM -0.9 -1.5 -1.1 N.D. +0.3
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.5 -0.9 -0.6 N.D. -0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.2 -1.2 -0.7 N.D. -0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.7 +0.2 -1.3 N.D. -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -2.6 -0.7 -0.2 N.D. +0.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.3 -0.6 -0.8 N.D. -0.3
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.6 -0.6 -0.5 N.D. -0.3
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.2 -0.8 -0.3 N.D. -0.7
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.5 -0.6 -0.5 N.D. -0.4
phage AgroPhage_D04 -2.9 -0.1 +0.4 N.D. -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.5 -1.0 -0.8 N.D. +0.6
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.6 -0.5 -0.7 N.D. +0.1
lb control LB control -1.3 -0.7 -0.9 N.D. +0.2
stress R2A with hypochlorite 6.25 mM -1.2 -1.1 -0.6 N.D. +0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 -0.7 -1.7 N.D. -0.6
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.8 -0.5 -1.0 N.D. +0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.0 -0.7 -0.4 N.D. +1.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.1 -0.7 +0.1 N.D. +1.1
nitrogen source DL-2-Aminobutyric (N) +0.3 +2.2 +0.3 N.D. +0.1
stress R2A with Polymyxin B sulfate 0.00075 mM +1.7 +1.0 +0.8 N.D. +0.4
stress R2A with m-arsenite 0.8 mM +1.1 +1.0 +1.3 N.D. +0.6
stress R2A with Tetracycline 0.002 mM +1.3 +0.8 +1.1 N.D. +0.8
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