Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 953 experiments or choose conditions or try the comparative fitness browser

500 ntAtu3516 and Atu3517 overlap by 4 nucleotidesAtu3517 and Atu3518 are separated by 18 nucleotidesAtu3518 and Atu3519 are separated by 92 nucleotidesAtu3519 and Atu3520 are separated by 242 nucleotides Atu3516: Atu3516 - MutT family NTP pyrophosphatase, at 563,609 to 564,022 Atu3516 Atu3517: Atu3517 - acetyltransferase, at 564,019 to 564,795 Atu3517 Atu3518: Atu3518 - bifunctional ornithine acetyltransferase/N-acetylglutamate synthase, at 564,814 to 566,055 Atu3518 Atu3519: Atu3519 - peptidyl-prolyl cis-trans isomerase, at 566,148 to 567,014 Atu3519 Atu3520: Atu3520 - preprotein translocase subunit SecA, at 567,257 to 569,965 Atu3520
Group Condition Atu3516 Atu3517 Atu3518 Atu3519 Atu3520
stress R2A with Vancomycin 0.009 mM +0.2 -2.7 -3.5 -1.1 N.D.
stress R2A with Vancomycin 0.009 mM -0.0 -2.7 -2.6 -0.6 N.D.
stress R2A with Calcium Chloride Dihydrate 87.5 mM +0.3 -1.4 -1.8 -1.3 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -2.6 -0.7 -0.2 N.D.
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -1.4 -1.1 -1.0 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -1.5 -1.0 -0.8 N.D.
stress R2A with Calcium Chloride Dihydrate 87.5 mM +0.1 -0.9 -1.5 -1.1 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -1.2 -1.2 -0.7 N.D.
stress methyl jasmonate 5 mM +0.1 -1.0 -0.8 -1.6 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.7 -1.0 -1.3 -0.2 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.2 -0.7 -0.6 -0.8 N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -1.6 -0.5 -0.7 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -1.4 -1.1 -0.2 N.D.
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -1.9 -0.8 -0.5 N.D.
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -1.8 -0.7 -0.7 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -1.5 -0.9 -0.6 N.D.
phage AgroPhage_D04 -0.1 -2.9 -0.1 +0.4 N.D.
lb_sorghum f72 f505 LB_Sorghum F72 F505 +0.3 -1.4 -0.6 -0.7 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -1.3 -0.6 -0.8 N.D.
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 -2.0 -0.3 -0.8 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 -1.7 +0.2 -1.3 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 -1.3 -0.7 -0.6 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.6 -0.7 -1.7 N.D.
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.7 -1.6 -0.2 -0.5 N.D.
phage AgroPhage_E04 +0.5 -0.3 -1.1 +1.2 N.D.
nitrogen source DL-2-Aminobutyric (N) -0.6 +0.3 +2.2 +0.3 N.D.
stress R2A with Tetracycline 0.002 mM -0.2 +1.3 +0.6 +1.0 N.D.
stress R2A with Tetracycline 0.002 mM -0.0 +1.3 +0.8 +1.1 N.D.
stress R2A with Polymyxin B sulfate 0.00075 mM +0.2 +1.7 +1.0 +0.8 N.D.
stress R2A with m-arsenite 0.8 mM +0.4 +1.1 +1.0 +1.3 N.D.
remove
Atu3516
plot		 remove
Atu3517
plot		 remove
Atu3518		 remove
Atu3519
plot		 remove
Atu3520
plot