Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3511 and Atu3512 are separated by 12 nucleotidesAtu3512 and Atu3513 are separated by 142 nucleotidesAtu3513 and Atu3514 are separated by 17 nucleotidesAtu3514 and Atu3515 are separated by 71 nucleotides Atu3511: Atu3511 - glutaredoxin, at 560,687 to 560,989 Atu3511 Atu3512: Atu3512 - competence protein F, at 561,002 to 561,793 Atu3512 Atu3513: Atu3513 - methyltransferase, at 561,936 to 562,817 Atu3513 Atu3514: Atu3514 - fimbriae associated protein, at 562,835 to 563,050 Atu3514 Atu3515: Atu3515 - hypothetical protein, at 563,122 to 563,436 Atu3515
Group Condition Atu3511 Atu3512 Atu3513 Atu3514 Atu3515
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 -1.2 -0.2 N.D. N.D. -0.7
stress R2A with m-arsenite 0.8 mM -1.5 +0.2 N.D. N.D. -0.7
no phage P4L5 -1.4 -0.0 N.D. N.D. -0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.1 +0.1 N.D. N.D. -0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 -1.0 -0.1 N.D. N.D. -0.4
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.6 +0.2 N.D. N.D. -0.7
stress R2A with Ceftriaxone hemi(heptahydrate) 0.0005 mM -0.5 +0.1 N.D. N.D. -0.8
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.5 +0.4 N.D. N.D. +0.1
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.2 N.D. N.D. -1.0
stress R2A with Vancomycin 0.009 mM +0.2 +0.1 N.D. N.D. -1.2
nophagecontrol No phage control -1.4 +0.1 N.D. N.D. +0.4
no phage P3L4 -1.2 +0.3 N.D. N.D. -0.0
stress Erythromycin 12.5 ug/mL +0.4 -0.2 N.D. N.D. -1.1
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 -0.0 N.D. N.D. -1.3
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.3 -0.0 N.D. N.D. +0.6
phage AgroPhage_E10 +0.6 -0.3 N.D. N.D. -1.0
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.9 +0.4 N.D. N.D. +0.4
in planta Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 -0.1 N.D. N.D. -0.6
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.8 -0.1 N.D. N.D. -0.5
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.6 +0.2 N.D. N.D. -0.5
phage AgroPhage_C04 +0.9 -0.3 N.D. N.D. -0.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.2 N.D. N.D. +0.7
Atjh2 -0.5 +0.3 N.D. N.D. +0.8
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -0.4 N.D. N.D. +0.6
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.1 N.D. N.D. +0.8
phage AgroPhage_F04 +0.8 -0.0 N.D. N.D. +0.6
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.4 N.D. N.D. +0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.7 +0.2 N.D. N.D. +0.8
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +1.0 +0.2 N.D. N.D. +0.7
Atjh14 +1.0 +0.7 N.D. N.D. +1.5
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