Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3483 and Atu3484 are separated by 34 nucleotidesAtu3484 and Atu3485 are separated by 50 nucleotidesAtu3485 and Atu3486 are separated by 200 nucleotidesAtu3486 and Atu3487 are separated by 47 nucleotides Atu3483: Atu3483 - 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 532,015 to 532,854 Atu3483 Atu3484: Atu3484 - hypothetical protein, at 532,889 to 534,181 Atu3484 Atu3485: Atu3485 - short chain dehydrogenase, at 534,232 to 536,328 Atu3485 Atu3486: Atu3486 - DeoR family transcriptional regulator, at 536,529 to 537,359 Atu3486 Atu3487: Atu3487 - sugar ABC transporter substrate-binding protein, at 537,407 to 538,417 Atu3487
Group Condition Atu3483 Atu3484 Atu3485 Atu3486 Atu3487
carbon source L-Rhamnose (C) -5.7 -2.8 -4.6 -2.9 -2.8
carbon source L-Rhamnose (C) -4.5 -2.8 -4.2 -1.5 -2.9
carbon source m-Inositol (C) -4.4 -0.1 -1.0 -3.5 +0.1
carbon source D-glutamine (C) -4.4 +0.0 -0.6 -3.7 -0.2
carbon source L-Galactose (C) -6.1 +0.2 -0.9 -2.1 +0.0
carbon source Protocatechuic Acid (C) -7.8 -0.0 -0.1 -0.7 -0.0
carbon source L-Galactose (C) -5.7 +0.1 -1.3 -1.4 -0.2
carbon source NAG (C) -6.2 +0.1 -1.8 -0.3 -0.1
carbon source acetate (C) -6.0 +0.0 -0.7 -1.2 -0.1
carbon source D-Glucose-6-Phosphate (C) -6.7 +0.0 -0.7 -0.6 -0.0
carbon source m-Inositol (C) -4.7 -0.1 -1.0 -2.1 +0.0
carbon source D-Glucose (C) -6.8 -0.0 -0.5 -0.5 +0.0
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.2 +0.2 -0.5 -5.9 -0.3
carbon source Protocatechuic Acid (C) -7.0 -0.0 -0.0 -0.6 -0.1
carbon source D-Galactose (C) -6.1 +0.0 -0.8 -0.8 +0.0
carbon source p-Coumaric (C) -3.5 +0.1 -1.0 -3.2 -0.1
carbon source D-Mannose (C) -5.8 +0.0 -0.5 -1.0 -0.2
carbon source Sucrose (C) -6.6 +0.1 -0.6 -0.4 +0.1
carbon source D-(+)-Turanose (C) -4.0 -0.2 -0.8 -2.3 +0.1
carbon source Beta-alanine (C) -4.4 -0.0 -0.7 -2.1 +0.1
carbon source D-Quinic (C) -6.8 +0.2 -0.5 +0.0 -0.2
carbon source D-(+)-Turanose (C) -4.6 -0.1 -0.8 -1.7 +0.0
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 -0.1 -0.5 -6.0 +0.1
carbon source D-Mannose (C) -6.2 +0.1 -0.4 -0.5 -0.1
carbon source NAG (C) -4.6 +0.3 -1.5 -1.0 -0.1
carbon source Maltotriose (C) -4.1 +0.1 -0.8 -2.2 +0.3
carbon source L-ascorbate (C) -3.8 -0.1 +1.1 -3.0 +0.2
carbon source L-ascorbate (C) -4.3 +0.0 +2.5 -2.5 +0.1
carbon source L-Sorbose (C) -4.6 +0.1 +1.8 -1.4 -0.0
carbon source L-Sorbose (C) -4.6 +0.0 +1.9 -0.8 +0.1
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