Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3482 and Atu3483 overlap by 4 nucleotidesAtu3483 and Atu3484 are separated by 34 nucleotidesAtu3484 and Atu3485 are separated by 50 nucleotidesAtu3485 and Atu3486 are separated by 200 nucleotides Atu3482: Atu3482 - pantoate--beta-alanine ligase, at 531,140 to 532,018 Atu3482 Atu3483: Atu3483 - 3-methyl-2-oxobutanoate hydroxymethyltransferase, at 532,015 to 532,854 Atu3483 Atu3484: Atu3484 - hypothetical protein, at 532,889 to 534,181 Atu3484 Atu3485: Atu3485 - short chain dehydrogenase, at 534,232 to 536,328 Atu3485 Atu3486: Atu3486 - DeoR family transcriptional regulator, at 536,529 to 537,359 Atu3486
Group Condition Atu3482 Atu3483 Atu3484 Atu3485 Atu3486
carbon source L-Rhamnose (C) -4.5 -5.7 -2.8 -4.6 -2.9
carbon source L-Rhamnose (C) -4.1 -4.5 -2.8 -4.2 -1.5
carbon source Protocatechuic Acid (C) -6.4 -7.8 -0.0 -0.1 -0.7
carbon source Protocatechuic Acid (C) -7.2 -7.0 -0.0 -0.0 -0.6
carbon source D-Mannose (C) -7.4 -5.8 +0.0 -0.5 -1.0
carbon source D-Quinic (C) -7.0 -6.8 +0.2 -0.5 +0.0
carbon source D-Glucose (C) -6.2 -6.8 -0.0 -0.5 -0.5
carbon source L-Galactose (C) -5.4 -5.7 +0.1 -1.3 -1.4
carbon source D-Mannose (C) -6.6 -6.2 +0.1 -0.4 -0.5
carbon source D-Glucose-6-Phosphate (C) -5.6 -6.7 +0.0 -0.7 -0.6
carbon source L-Galactose (C) -4.6 -6.1 +0.2 -0.9 -2.1
carbon source D-Cellobiose (C) -6.5 -5.9 +0.0 -0.4 -0.7
carbon source NAG (C) -5.1 -6.2 +0.1 -1.8 -0.3
carbon source acetate (C) -5.4 -6.0 +0.0 -0.7 -1.2
carbon source m-Inositol (C) -4.2 -4.4 -0.1 -1.0 -3.5
carbon source Sucrose (C) -5.7 -6.6 +0.1 -0.6 -0.4
carbon source D-Mannitol (C) -6.5 -5.6 -0.1 -0.6 -0.4
carbon source D-Mannitol (C) -6.9 -5.2 +0.1 -0.6 -0.4
carbon source NAG (C) -6.1 -4.6 +0.3 -1.5 -1.0
carbon source D-Galactose (C) -5.2 -6.1 +0.0 -0.8 -0.8
carbon source D-Glucuronic gamma lactone (C) -6.9 -5.6 +0.2 -0.3 -0.3
carbon source D-Fructose (C) -6.3 -5.6 -0.1 -0.4 -0.3
carbon source m-Inositol (C) -4.6 -4.7 -0.1 -1.0 -2.1
carbon source D-glutamine (C) -3.5 -4.4 +0.0 -0.6 -3.7
carbon source Ribitol (C) -6.8 -4.9 +0.2 -0.5 -0.1
carbon source D-Ribose (C) -6.3 -5.6 +0.0 +1.1 +0.2
carbon source L-Sorbose (C) -6.2 -4.6 +0.1 +1.8 -1.4
carbon source gluconate (C) -5.8 -4.5 -0.1 -0.7 +1.2
carbon source L-Sorbose (C) -5.6 -4.6 +0.0 +1.9 -0.8
carbon source L-ascorbate (C) -4.1 -4.3 +0.0 +2.5 -2.5
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