Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3478 and Atu3479 are separated by 7 nucleotidesAtu3479 and Atu3480 are separated by 1 nucleotidesAtu3480 and Atu3481 overlap by 11 nucleotidesAtu3481 and Atu3482 are separated by 140 nucleotides Atu3478: Atu3478 - 3-methylcrotonoyl-CoA carboxylase beta subunit, at 525,705 to 527,306 Atu3478 Atu3479: Atu3479 - 3-methylcrotonyl-CoA carboxylase subunit alpha, at 527,314 to 529,305 Atu3479 Atu3480: Atu3480 - hydroxymethylglutaryl-CoA lyase, at 529,307 to 530,233 Atu3480 Atu3481: Atu3481 - enoyl-CoA hydratase, at 530,223 to 530,999 Atu3481 Atu3482: Atu3482 - pantoate--beta-alanine ligase, at 531,140 to 532,018 Atu3482
Group Condition Atu3478 Atu3479 Atu3480 Atu3481 Atu3482
carbon source Protocatechuic Acid (C) -0.1 -0.2 +0.1 -0.2 -7.2
carbon source D-Quinic (C) -0.0 -0.1 -0.1 -0.0 -7.0
carbon source D-Glucuronic gamma lactone (C) +0.0 -0.1 +0.1 +0.0 -6.9
carbon source D-Mannose (C) +0.1 +0.1 +0.2 +0.2 -7.4
carbon source Ribitol (C) -0.0 -0.0 +0.1 +0.1 -6.8
carbon source D-Fructose (C) +0.0 -0.1 -0.1 -0.0 -6.3
carbon source D-Mannitol (C) +0.1 +0.1 +0.1 +0.1 -6.9
carbon source acetate (C) -0.0 -0.2 -0.4 -0.3 -5.4
carbon source D-Mannitol (C) -0.0 +0.0 +0.1 -0.0 -6.5
carbon source Protocatechuic Acid (C) -0.0 +0.0 -0.1 +0.1 -6.4
carbon source D-Ribose (C) -0.0 +0.0 +0.1 -0.0 -6.3
carbon source D-Glucose (C) -0.1 -0.0 -0.0 +0.0 -6.2
carbon source L-Sorbose (C) -0.2 -0.1 +0.3 +0.0 -6.2
carbon source D-Cellobiose (C) +0.2 +0.0 +0.1 +0.1 -6.5
carbon source methyl-beta-D-xylopyranoside (C) +0.1 -0.1 -0.0 +0.1 -6.2
carbon source D-Glucose (C) +0.1 -0.1 +0.0 -0.0 -6.0
carbon source Ribitol (C) +0.1 +0.0 -0.0 +0.3 -6.3
carbon source D-Mannose (C) +0.2 +0.1 +0.1 +0.3 -6.6
carbon source NAG (C) -0.0 +0.1 +0.2 -0.0 -6.1
carbon source D-Galactose (C) +0.1 +0.1 -0.1 -0.1 -5.8
carbon source gluconate (C) +0.0 -0.0 +0.1 -0.1 -5.8
carbon source Xylobiose (C) +0.1 -0.0 -0.2 +0.1 -5.7
carbon source D-Glucose-6-Phosphate (C) -0.0 +0.1 +0.1 -0.1 -5.6
carbon source D-Quinic (C) +0.0 -0.1 +0.2 +0.3 -5.9
carbon source Sucrose (C) +0.1 -0.0 -0.0 +0.2 -5.7
carbon source L-Sorbose (C) +0.2 -0.1 -0.1 +0.2 -5.6
carbon source L-Arabinose (C) -0.1 +0.0 +0.2 +0.3 -5.7
carbon source D-Glucose-6-Phosphate (C) +0.1 +0.1 -0.2 +0.4 -5.6
carbon source Xylobiose (C) +0.2 -0.1 +0.2 +0.3 -5.4
carbon source D-Galacturonic Acid (C) +0.2 +0.0 +0.0 +0.4 -5.4
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