Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 953 experiments or choose conditions or try the comparative fitness browser

500 ntAtu3470 and Atu3471 are separated by 194 nucleotidesAtu3471 and Atu3472 are separated by 2 nucleotidesAtu3472 and Atu3473 are separated by 3 nucleotidesAtu3473 and Atu3474 are separated by 44 nucleotides Atu3470: Atu3470 - hypothetical protein, at 517,516 to 517,710 Atu3470 Atu3471: Atu3471 - branched-chain alpha-keto acid dehydrogenase subunit E2, at 517,905 to 519,182 Atu3471 Atu3472: Atu3472 - 2-oxoisovalerate dehydrogenase subunit beta, at 519,185 to 520,198 Atu3472 Atu3473: Atu3473 - 2-oxoisovalerate dehydrogenase subunit alpha, at 520,202 to 521,440 Atu3473 Atu3474: Atu3474 - acyl-CoA dehydrogenase, at 521,485 to 522,612 Atu3474
Group Condition Atu3470 Atu3471 Atu3472 Atu3473 Atu3474
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -1.7 -1.5 -0.6 -1.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -1.3 -0.4 -1.8 -0.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -1.1 -1.0 -1.0 -0.8
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.9 -1.3 -0.6 -0.8
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -1.0 -0.7 -1.3 -0.6
lb_ntabacum_leaf LB_Ntabacum_leaf N.D. -0.9 -1.0 -0.7 -0.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -1.1 -0.7 -1.0 -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -1.0 -0.8 -0.7 -0.4
lb LB N.D. -0.7 -0.7 -0.6 -0.7
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.8 -0.7 -0.4 -0.7
lb LB N.D. -0.8 -0.5 -0.7 -0.6
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.9 -0.6 -0.4 -0.7
stress R2A with bromate 5 mM N.D. -0.6 -0.7 -0.4 -0.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.7 -0.2 -0.5 -1.0
stress R2A with Carbenicillin 150 mM N.D. -0.6 -0.5 -0.7 -0.5
stress Rosmarinic 5 mM N.D. -0.5 -0.5 -0.6 -0.4
stress R2A with bromate 5 mM N.D. -0.4 -0.6 -0.5 -0.6
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -1.0 -0.1 -0.7 -0.2
stress R2A with Azlocillin 0.2 mM N.D. -0.5 -0.4 -0.4 -0.6
lb_ntabacum_leaf LB_Ntabacum_leaf N.D. -0.4 -0.4 -0.5 -0.6
stress pinene 5 mM N.D. -0.5 -0.4 -0.5 -0.3
lb_ntabacum_leaf LB_Ntabacum_leaf N.D. -0.4 -0.6 -0.4 -0.4
stress R2A with beryllium sulfate tetrahydrate 0.2 mM N.D. -0.4 -0.6 -0.3 -0.4
stress R2A with rubidium chloride 600 mM N.D. -0.5 -0.6 -0.2 -0.6
stress Rosmarinic 5 mM N.D. -0.5 -0.4 -0.4 -0.4
stress R2A with chromate 0.1 mM N.D. -0.5 -0.3 -0.5 -0.4
stress R2A with Chlorate 400 mM N.D. -0.5 -0.2 -0.4 -0.5
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct N.D. -0.6 -0.6 -0.9 +0.7
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI N.D. +0.4 -0.4 -0.4 -0.5
phage AgroPhage_E10 N.D. -0.6 +1.3 +0.1 +0.5
remove
Atu3470
plot		 remove
Atu3471
plot		 remove
Atu3472		 remove
Atu3473
plot		 remove
Atu3474
plot