Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3467 and Atu3468 overlap by 4 nucleotidesAtu3468 and Atu3469 are separated by 74 nucleotidesAtu3469 and Atu3470 overlap by 28 nucleotidesAtu3470 and Atu3471 are separated by 194 nucleotides Atu3467: Atu3467 - hypothetical protein, at 515,143 to 515,517 Atu3467 Atu3468: Atu3468 - hypothetical protein, at 515,514 to 515,951 Atu3468 Atu3469: Atu3469 - phosphoglyceromutase, at 516,026 to 517,543 Atu3469 Atu3470: Atu3470 - hypothetical protein, at 517,516 to 517,710 Atu3470 Atu3471: Atu3471 - branched-chain alpha-keto acid dehydrogenase subunit E2, at 517,905 to 519,182 Atu3471
Group Condition Atu3467 Atu3468 Atu3469 Atu3470 Atu3471
nitrogen source L-Histidine (N) -0.7 -3.2 -5.0 N.D. -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 -3.9 -2.9 N.D. -0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 -3.8 -3.1 N.D. -0.1
carbon source Protocatechuic Acid (C) -0.3 -1.4 -5.4 N.D. -0.1
nitrogen source L-Lysine (N) -0.3 -1.8 -5.1 N.D. +0.1
nitrogen source L-Cysteine (N) -1.2 -1.9 -3.8 N.D. -0.0
stress R2A with hypochlorite 6.25 mM -0.2 -2.4 -4.4 N.D. -0.0
carbon source D-Mannitol (C) -0.3 -1.0 -5.4 N.D. -0.2
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.6 -4.9 -1.4 N.D. +0.1
carbon source D-Mannose (C) -0.4 -1.0 -5.2 N.D. -0.1
carbon source L-ascorbate (C) +0.0 -1.8 -4.9 N.D. +0.0
stress Chloramphenicol 12.5 ug/mL -0.8 -3.0 -2.8 N.D. +0.1
carbon source Lactulose (C) -0.3 -1.1 -5.0 N.D. -0.1
nitrogen source Urea (N) +0.0 -1.9 -4.4 N.D. -0.1
carbon source Betanin (C) -0.1 -1.6 -4.8 N.D. +0.0
carbon source succinate (C) -0.6 -0.3 -5.4 N.D. -0.1
nitrogen source L-Pipecolic Acid (N) -0.1 -1.2 -5.1 N.D. -0.0
carbon source L-Arabinose (C) -0.5 -0.4 -5.5 N.D. -0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -3.7 -2.1 N.D. -0.6
nitrogen source L-Aspartic Acid (N) -0.5 -0.9 -5.0 N.D. +0.1
carbon source L-Arabinose (C) -0.6 -0.1 -5.4 N.D. -0.1
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -4.0 -2.4 N.D. -0.2
carbon source D-Fructose (C) -0.4 -1.3 -4.4 N.D. -0.1
nitrogen source 4-Aminobutyric (N) -0.0 -1.1 -5.0 N.D. -0.2
carbon source palatinose (C) -0.2 -0.6 -5.3 N.D. +0.1
carbon source D-Glucose (C) -0.4 +0.2 -5.5 N.D. -0.2
carbon source Gentibiose (C) +0.3 -1.1 -4.8 N.D. -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 +1.7 -3.6 N.D. -1.7
carbon source palatinose (C) +0.5 +0.9 -4.9 N.D. -0.1
Atjh14 -1.6 -1.8 +3.3 N.D. -0.2
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