Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu3454	Atu3455	Atu3456	Atu3457	Atu3458
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.1	-0.3	-0.4	-0.3	+0.1
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.7	-0.1	-0.3	+0.7	-0.3
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.2	-0.3	-0.3	+0.3	-0.4
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.2	-0.0	-0.4	+0.5	-0.2
nitrogen source	DL-2-Aminobutyric (N)	-0.2	-0.3	+0.1	+0.3	-0.3
nophagecontrol	No phage control	+0.4	-0.4	-0.2	-0.1	+0.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.0	+0.0	-0.3	+0.4	-0.4
stress	R2A with m-arsenite 0.8 mM	-0.3	+0.3	-0.4	+0.1	-0.0
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.4	+0.4	-0.4	+0.3	-0.1
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.1	+0.3	-0.4	-0.3
phage	AgroPhage_D10	+0.1	+0.4	-0.6	+0.2	-0.0
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.1	-0.5	+0.4	+0.2	-0.1
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.3	+0.5	-0.3	-0.0	+0.2
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.2	-0.3	+0.5	-0.2	+0.1
phage	AgroPhage_E04	+0.6	-0.2	+0.0	+0.2	-0.3
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.0	+0.5	-0.2	+0.4	-0.2
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.4	+0.3	+0.2	-0.3	-0.0
phage	AgroPhage_H04	+0.4	+0.2	-0.3	-0.2	+0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant	-0.2	-0.2	+0.4	+0.5	-0.1
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	-0.3	+0.6	+0.3	-0.1
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.6	-0.3	-0.0	+0.4	-0.1
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.3	-0.1	-0.0	+0.9	-0.4
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	-0.2	+0.3	+0.2	+0.4
no phage	P5L5	+0.4	-0.0	+0.4	-0.2	+0.2
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.3	+0.4	+0.2	+0.4	-0.4
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.5	+0.2	-0.1	+0.2	+0.2
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.0	+0.1	+0.7	+0.4	+0.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.2	+0.2	+0.6	+0.6	+0.5
carbon source	Rhamnogalacturonan - from potato (C)	+0.7	+0.8	+0.7	+0.4	+0.4
carbon source	Rhamnogalacturonan - from potato (C)	+0.5	+0.7	+0.7	+0.5	+0.6