Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3441 and Atu3442 are separated by 55 nucleotidesAtu3442 and Atu3443 are separated by 42 nucleotidesAtu3443 and Atu3444 are separated by 222 nucleotidesAtu3444 and Atu3445 overlap by 8 nucleotides Atu3441: Atu3441 - nitrilotriacetate monooxygenase, at 488,032 to 489,384 Atu3441 Atu3442: Atu3442 - oligopeptide ABC transporter substrate-binding protein, at 489,440 to 491,035 Atu3442 Atu3443: Atu3443 - hypothetical protein, at 491,078 to 491,527 Atu3443 Atu3444: Atu3444 - oligopeptide ABC transporter substrate-binding protein, at 491,750 to 493,381 Atu3444 Atu3445: Atu3445 - hippurate hydrolase, at 493,374 to 494,573 Atu3445
Group Condition Atu3441 Atu3442 Atu3443 Atu3444 Atu3445
Atjh14 -0.3 -0.0 -3.6 +0.1 +0.0
phage AgroPhage_D04 -0.1 +0.3 -3.2 +0.1 +0.1
phage AgroPhage_C04 -0.2 +0.2 -2.2 +0.0 -0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 +0.3 -2.2 +0.0 +0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -0.1 -1.6 -0.0 +0.0
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.4 -1.4 +0.0 -0.3
stress R2A with bromate 5 mM +0.0 -0.0 -1.2 -0.1 +0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.3 -1.7 +0.1 +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 -0.1 -1.0 -0.1 +0.1
Atjh2 +0.1 -0.1 -0.9 -0.0 -0.2
stress R2A with tungstate 375 mM -0.2 -0.1 -0.9 -0.0 +0.2
no phage P3L4 +0.0 -0.1 -1.0 -0.0 +0.1
nophagecontrol No phage control +0.4 +0.1 -1.4 +0.1 +0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 -0.2 -0.7 +0.3 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 -0.3 -0.7 +0.0 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 -0.1 -0.3 -0.3 -0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.3 -0.4 +0.2 -0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.3 -0.3 -0.3 +0.2
stress R2A with Vancomycin 0.009 mM -0.2 +0.5 -0.5 +0.1 -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.2 -0.8 +0.1 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -0.2 +0.7 -0.1 -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.4 +0.3 +0.3 -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -0.5 +0.7 +0.0 +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 +0.2 +0.6 -0.1 -0.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -0.2 +0.8 +0.1 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.3 -0.1 +0.5 -0.2 +0.4
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.2 +0.6 -0.1 -0.2
phage AgroPhage_B01 +0.2 +0.3 +0.5 +0.2 -0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.2 +1.0 +0.0 -0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.2 +1.4 +0.3 +0.4
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