Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3434 and Atu3435 overlap by 4 nucleotidesAtu3435 and Atu3436 overlap by 4 nucleotidesAtu3436 and Atu3437 overlap by 23 nucleotidesAtu3437 and Atu3438 are separated by 18 nucleotides Atu3434: Atu3434 - oligopeptide ABC transporter permease, at 480,755 to 481,744 Atu3434 Atu3435: Atu3435 - oligopeptide ABC transporter permease, at 481,741 to 482,736 Atu3435 Atu3436: Atu3436 - oligopeptide ABC transporter ATPase, at 482,733 to 483,731 Atu3436 Atu3437: Atu3437 - oligopeptide ABC transporter ATPase, at 483,709 to 484,644 Atu3437 Atu3438: Atu3438 - oxidoreductase, at 484,663 to 485,718 Atu3438
Group Condition Atu3434 Atu3435 Atu3436 Atu3437 Atu3438
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.5 -0.3 +0.1 -0.3 +0.0
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -0.5 -0.5 -0.6 +0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -1.0 -0.3 +0.7 -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 -0.3 -0.4 +0.0 -0.5
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.3 -0.2 -0.0 -0.6
stress Erythromycin 12.5 ug/mL -0.3 +0.3 -0.3 -0.1 -0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.6 +0.3 -0.2 +0.1
phage phage 99.1 -0.2 +0.3 -0.2 +0.1 -0.4
stress Chloramphenicol 12.5 ug/mL -0.6 +0.0 +0.4 +0.3 -0.6
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.6 +0.2 -0.1 -0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.4 +0.2 -0.2 +0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.3 +0.2 -0.2 -0.4
phage AgroPhage_A01 -0.4 +0.3 +0.2 -0.0 -0.4
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.7 +0.1 +0.1 -0.3
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.2 +0.7 -0.2 -0.3
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.0 -0.4 +0.1 -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 +0.4 -0.1 +0.3 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.5 +0.1 -0.1 +0.3
phage AgroPhage_H04 +0.3 -0.1 +0.2 +0.3 -0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 -0.3 +0.3 -0.1 -0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.5 +0.1 -0.0 +0.1 +0.7
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.4 +0.3 -0.3 +0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.8 -0.5 +0.0 -0.2 +0.3
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.6 +0.2 +0.7 +0.4 -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.0 +0.6 +0.3 -0.2 +0.2
stress R2A with Vancomycin 0.009 mM +0.3 +0.3 -0.2 +0.4 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.5 -0.1 +0.2 +0.1
Atjh15 +0.4 +0.3 +0.1 +0.2 +0.2
Atjh14 +0.5 +0.3 -0.1 +0.2 +0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.9 -0.1 +0.8 +0.2 +0.2
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