Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3411 and Atu3412 overlap by 1 nucleotidesAtu3412 and Atu3413 are separated by 186 nucleotidesAtu3413 and Atu3414 are separated by 230 nucleotidesAtu3414 and Atu3415 are separated by 90 nucleotides Atu3411: Atu3411 - ABC transporter permease, at 457,440 to 458,291 Atu3411 Atu3412: Atu3412 - ABC transporter permease, at 458,291 to 459,946 Atu3412 Atu3413: Atu3413 - AsnC family transcriptional regulator, at 460,133 to 460,609 Atu3413 Atu3414: Atu3414 - AgaE protein, at 460,840 to 462,165 Atu3414 Atu3415: Atu3415 - ABC transporter substrate binding protein, at 462,256 to 463,191 Atu3415
Group Condition Atu3411 Atu3412 Atu3413 Atu3414 Atu3415
phage AgroPhage_C10 +0.1 +0.0 -3.0 -0.0 -0.5
stress Chloramphenicol 12.5 ug/mL -0.3 -0.1 -2.2 +0.0 -0.4
phage phage 100.2 +0.4 -0.1 -2.7 -0.1 -0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.1 -0.9 -0.8 -0.4
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 -0.2 -1.3 -0.2 +0.1
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 +0.2 -2.1 +0.1 +0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.1 -0.7 -0.1 -0.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.2 -1.4 +0.1 +0.3
in planta Bethi_Library_OD0.1 -0.1 -0.0 -1.6 +0.2 +0.1
phage Phage 95.3 + bacteria -0.2 +0.4 -1.1 -0.0 -0.5
in planta Bethi_Library_OD0.05 -0.2 -0.1 -0.6 +0.1 -0.6
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.7 +0.2 -1.1 -0.1 +0.6
stress Erythromycin 6.25 ug/mL -0.1 +0.0 -1.0 +0.3 -0.4
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.3 +0.1 -0.8 -0.3 +0.3
phage AgroPhage_F04 +0.2 +0.0 +0.3 -0.1 -1.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.1 -1.3 +0.2 -0.2
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.2 -1.2 +0.2 +0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.4 -0.9 +0.2 +0.2
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 -0.2 -0.2 -0.5 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 +0.2 -0.7 -0.2 +0.4
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.4 -0.4 -0.2 +0.4
nitrogen source DL-2-Aminobutyric (N) -0.5 -0.4 +0.1 +0.3 +0.9
phage AgroPhage_D04 +0.1 +0.0 +1.0 +0.0 -0.5
Atjh10 +0.0 +0.2 +0.9 -0.3 -0.1
phage AgroPhage_C04 +0.4 +0.2 +1.1 +0.1 -0.6
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 +0.3 +0.9 +0.2 -0.2
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.2 +0.2 +0.3 +0.8
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.0 +1.0 +0.0 +0.5
Atjh14 +0.4 +0.2 +1.3 +0.1 +0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.3 +0.4 +0.2 +0.8
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