Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3404 and Atu3405 are separated by 15 nucleotidesAtu3405 and Atu3406 are separated by 323 nucleotidesAtu3406 and Atu3407 are separated by 14 nucleotidesAtu3407 and Atu3408 are separated by 124 nucleotides Atu3404: Atu3404 - oxidoreductase, at 449,217 to 450,491 Atu3404 Atu3405: Atu3405 - haloalkanoic acid dehalogenase, at 450,507 to 451,175 Atu3405 Atu3406: Atu3406 - hypothetical protein, at 451,499 to 452,335 Atu3406 Atu3407: Atu3407 - hypothetical protein, at 452,350 to 453,723 Atu3407 Atu3408: Atu3408 - 2-haloalkanoic acid dehalogenase, at 453,848 to 454,693 Atu3408
Group Condition Atu3404 Atu3405 Atu3406 Atu3407 Atu3408
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 -0.2 -0.2 -1.4 -0.2
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -0.3 -0.6 -1.0 -0.0
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 -0.1 -0.5 -0.8 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.3 -0.3 -0.7 -0.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.3 -0.2 -0.5 -0.3 -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.2 -0.3 -0.3 -0.6 -0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.1 -0.3 -0.7 -0.3 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.7 -0.4 -0.3 -0.0
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.3 -0.0 -0.3 -0.7 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 +0.1 -0.4 -0.5 -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.1 -0.7 -0.2 +0.2
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 +0.2 -0.3 -0.6 -0.3
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 +0.1 +0.0 -1.2 +0.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 +0.3 -0.1 -1.0 -0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.5 -0.3 -0.3 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.1 -0.3 -0.4 -0.4
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 +0.5 -0.1 -1.4 +0.1
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.0 +0.3 -0.5 -0.2 -0.3
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 +0.0 -0.3 -0.6 +0.4
phage AgroPhage_C10 -0.5 +0.1 -0.6 +0.3 -0.0
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days +0.1 +0.2 -0.4 -0.6 +0.1
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 +0.1 +0.1 -0.2 +0.6
phage AgroPhage_F10 -0.0 -0.0 -0.7 -0.0 +0.6
phage AgroPhage_E10 -0.7 +0.3 -0.3 +0.1 +0.4
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.2 -0.2 -0.1 +0.4
phage AgroPhage_C04 +0.6 -1.1 -0.2 +0.1 +0.6
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -0.3 +0.4 -0.1 +0.3
phage phage 100.2 +0.1 +0.3 +0.5 -0.2 +0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.3 -0.1 +0.1 +0.4 +0.5
nitrogen source DL-2-Aminobutyric (N) +1.0 +1.1 -0.4 +0.4 -0.0
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