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Protein
Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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500 nt
Atu3404 and Atu3405 are separated by 15 nucleotides
Atu3405 and Atu3406 are separated by 323 nucleotides
Atu3406 and Atu3407 are separated by 14 nucleotides
Atu3407 and Atu3408 are separated by 124 nucleotides
Atu3404: Atu3404 - oxidoreductase, at 449,217 to 450,491
Atu3404
Atu3405: Atu3405 - haloalkanoic acid dehalogenase, at 450,507 to 451,175
Atu3405
Atu3406: Atu3406 - hypothetical protein, at 451,499 to 452,335
Atu3406
Atu3407: Atu3407 - hypothetical protein, at 452,350 to 453,723
Atu3407
Atu3408: Atu3408 - 2-haloalkanoic acid dehalogenase, at 453,848 to 454,693
Atu3408
Group
Condition
Atu3404
Atu3405
Atu3406
Atu3407
Atu3408
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.3
-0.2
-0.2
-1.4
-0.2
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.1
-0.3
-0.6
-1.0
-0.0
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.3
-0.1
-0.5
-0.8
-0.2
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.1
-0.3
-0.3
-0.7
-0.4
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days
-0.3
-0.2
-0.5
-0.3
-0.1
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days
-0.2
-0.3
-0.3
-0.6
-0.1
in planta
Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days
+0.1
-0.3
-0.7
-0.3
-0.1
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.3
-0.7
-0.4
-0.3
-0.0
in planta
Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days
-0.3
-0.0
-0.3
-0.7
+0.2
in planta
Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.4
+0.1
-0.4
-0.5
-0.0
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.3
-0.1
-0.7
-0.2
+0.2
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.1
+0.2
-0.3
-0.6
-0.3
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.0
+0.1
+0.0
-1.2
+0.1
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.0
+0.3
-0.1
-1.0
-0.0
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.3
-0.5
-0.3
-0.3
-0.2
in planta
Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.3
-0.1
-0.3
-0.4
-0.4
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.0
+0.5
-0.1
-1.4
+0.1
in planta
Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days
-0.0
+0.3
-0.5
-0.2
-0.3
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.1
+0.0
-0.3
-0.6
+0.4
phage
AgroPhage_C10
-0.5
+0.1
-0.6
+0.3
-0.0
in planta
Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days
+0.1
+0.2
-0.4
-0.6
+0.1
in planta
Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.8
+0.1
+0.1
-0.2
+0.6
phage
AgroPhage_F10
-0.0
-0.0
-0.7
-0.0
+0.6
phage
AgroPhage_E10
-0.7
+0.3
-0.3
+0.1
+0.4
in planta
Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.4
+0.2
-0.2
-0.1
+0.4
phage
AgroPhage_C04
+0.6
-1.1
-0.2
+0.1
+0.6
in planta
Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.3
-0.3
+0.4
-0.1
+0.3
phage
phage 100.2
+0.1
+0.3
+0.5
-0.2
+0.3
agar plate interaction
Parafilmed volatile agar plate with Trichoderma atroviridae IMI
+0.3
-0.1
+0.1
+0.4
+0.5
nitrogen source
DL-2-Aminobutyric (N)
+1.0
+1.1
-0.4
+0.4
-0.0
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