Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3393 and Atu3394 overlap by 4 nucleotidesAtu3394 and Atu3395 overlap by 4 nucleotidesAtu3395 and Atu3396 are separated by 71 nucleotidesAtu3396 and Atu3397 are separated by 443 nucleotides Atu3393: Atu3393 - pseudoazurin, at 437,676 to 438,116 Atu3393 Atu3394: Atu3394 - iron ABC transporter ATPase, at 438,113 to 438,913 Atu3394 Atu3395: Atu3395 - iron (III ABC transporter permease ABC transporter permease, at 438,910 to 439,863 Atu3395 Atu3396: Atu3396 - ABC transporter substrate-binding protein, at 439,935 to 440,966 Atu3396 Atu3397: Atu3397 - hypothetical protein, at 441,410 to 442,285 Atu3397
Group Condition Atu3393 Atu3394 Atu3395 Atu3396 Atu3397
lb LB -0.1 -1.1 -0.9 -0.6 +0.1
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.8 -0.8 -0.1 -0.5
stress R2A with hypochlorite 6.25 mM -0.3 -1.0 -0.7 -0.6 +0.2
lb LB -0.1 -0.8 -0.7 -0.8 +0.0
Atjh14 -0.8 -0.5 -0.1 -1.1 +0.1
stress Chloramphenicol 12.5 ug/mL -0.6 -0.6 -0.7 -0.1 -0.2
stress Erythromycin 12.5 ug/mL -0.3 -1.2 -0.3 -0.5 +0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.7 -0.5 -0.4 -0.0 -0.4
lb LB -0.2 -0.7 -0.7 -0.6 +0.3
lb LB -0.2 -0.5 -0.5 -0.7 +0.1
lb LB -0.3 -0.2 -0.7 -0.6 +0.2
stress R2A with Cadmium chloride hemipentahydrate 0.02 mM -0.1 -0.6 -0.7 -0.5 +0.1
lb LB +0.0 -0.5 -0.6 -0.8 +0.2
stress Linalool 5 mM -0.1 -0.6 -0.7 -0.4 +0.3
stress R2A with tungstate 375 mM -1.0 -0.4 -0.3 +0.1 +0.3
lb LB +0.3 -0.8 -0.4 -0.5 +0.2
lb LB +0.6 -0.8 -0.3 -0.6 +0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.7 -0.2 +0.2 -0.5 +0.3
phage Phage 95.3 + bacteria +0.4 -0.5 -0.5 -0.6 +0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 -0.8 +0.2 +0.5 +0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.3 +0.6 +0.3 +0.4 -0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 +0.9 -0.3 +0.3 -0.5
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 +0.6 +0.2 +0.3 +0.1
nitrogen source 5-Aminovaleric (N) +0.0 -0.3 -0.2 -0.2 +1.5
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.1 +1.2 -0.2 +0.6 -0.2
nitrogen source DL-2-Aminobutyric (N) -0.7 +1.5 -0.0 +0.4 +0.1
stress R2A with Vancomycin 0.009 mM +0.6 +0.3 +0.6 +0.3 -0.4
phage AgroPhage_C10 +0.7 +0.1 +0.1 +0.1 +0.8
phage AgroPhage_E10 +1.5 +0.6 -0.1 -0.0 +0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +2.4 +0.1 +0.1 -0.2
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