Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3387 and Atu3388 are separated by 211 nucleotidesAtu3388 and Atu3389 overlap by 7 nucleotidesAtu3389 and Atu3390 overlap by 4 nucleotidesAtu3390 and Atu3391 are separated by 96 nucleotides Atu3387: Atu3387 - sigma factor, at 431,670 to 432,170 Atu3387 Atu3388: Atu3388 - iron ABC transporter ATPase, at 432,382 to 433,134 Atu3388 Atu3389: Atu3389 - iron ABC transporter permease, at 433,128 to 434,195 Atu3389 Atu3390: Atu3390 - ABC transporter substrate-binding protein, at 434,192 to 435,331 Atu3390 Atu3391: Atu3391 - ABC transporter substrate-binding protein, at 435,428 to 436,561 Atu3391
Group Condition Atu3387 Atu3388 Atu3389 Atu3390 Atu3391
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 -0.8 -0.9 -0.6 -1.1
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.9 -0.5 -0.6 -0.8 -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.3 -0.7 -0.7 -0.4 -0.8
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.5 -0.1 -0.2 -0.4 -0.7
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.2 -0.3 -0.8 -0.7 -0.7
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -1.0 -0.5 -0.5 -0.4 -0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -0.9 -0.7 -0.6 -0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -0.6 -0.7 -0.6 -0.7
nophagecontrol No phage control -1.5 -0.4 -0.4 +0.1 -0.1
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -0.5 -0.4 -0.8 -0.7
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.6 -1.0 -0.5 -0.0
stress R2A with EDTA 0.25 mM +0.0 -0.6 -0.6 -0.5 -0.6
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.3 -0.8 -0.4 -0.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days +0.6 -0.7 -0.4 -0.8 -0.8
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.6 -0.5 -0.6 -0.4
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -1.2 -0.5 -0.4 +0.1
phage AgroPhage_E04 -0.9 -0.6 +0.1 +0.3 -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.4 -0.3 -0.3 +0.1 +0.9
no phage P2L5 -1.3 +0.0 -0.0 +0.3 +0.5
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +1.6 -0.4 -0.5 -0.4 -0.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -1.2 +0.6 +0.3 +0.2 -0.2
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1 +0.7 +0.4 -0.1 -0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +1.8 -0.3 -0.3 -0.5 -0.6
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -1.1 +0.6 +0.1 -0.1 +0.7
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.7 +0.9 -0.1 +0.1 +0.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.6 +0.6 +0.7 +0.4 +0.5
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -0.5 +1.0 +0.7 +0.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 +0.5 +0.3 +0.5 +0.4
stress R2A with tungstate 375 mM -0.0 +0.5 +0.7 +0.4 +0.6
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +1.3 +0.5 +0.4 +0.5
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