Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3368 and Atu3369 are separated by 304 nucleotidesAtu3369 and Atu3370 are separated by 82 nucleotidesAtu3370 and Atu3371 are separated by 32 nucleotidesAtu3371 and Atu3372 are separated by 233 nucleotides Atu3368: Atu3368 - periplasmic mannitol-binding protein, at 408,413 to 409,510 Atu3368 Atu3369: Atu3369 - hypothetical protein, at 409,815 to 410,570 Atu3369 Atu3370: Atu3370 - sugar ABC transporter permease, at 410,653 to 411,681 Atu3370 Atu3371: Atu3371 - sugar ABC transporter ATPase, at 411,714 to 413,255 Atu3371 Atu3372: Atu3372 - sugar ABC transporter substrate-binding protein, at 413,489 to 414,418 Atu3372
Group Condition Atu3368 Atu3369 Atu3370 Atu3371 Atu3372
carbon source m-Inositol (C) -0.1 -0.0 -2.7 -2.6 -2.5
carbon source m-Inositol (C) +0.0 -0.1 -2.5 -2.2 -2.2
phage AgroPhage_C04 -1.2 -0.0 -0.3 -1.0 -0.0
nitrogen source spermidine (N) -0.2 -2.0 -0.0 -0.2 -0.1
nitrogen source spermidine (N) +0.0 -2.0 -0.0 -0.2 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -1.1 +0.2 -0.6 +0.0
phage AgroPhage_D10 +0.2 -0.4 -0.2 -1.0 +0.0
carbon source L-ascorbate (C) +0.4 -1.2 -0.2 -0.1 -0.1
nitrogen source Putrescine (N) +0.1 -0.9 -0.2 +0.0 -0.2
phage AgroPhage_C10 -0.6 -1.1 +0.1 +0.4 +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.1 -0.5 +0.3 -0.3
carbon source L-ascorbate (C) +0.2 -0.9 +0.0 -0.1 -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 -1.2 +0.4 -0.2 +0.3
no phage P4L5 -0.3 +0.2 -0.1 -0.6 +0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 -0.2 -0.1 -0.3 +0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.2 +0.1 +0.3 -0.6
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.4 -0.4 +0.1 -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.3 -0.4 -0.1 +0.4
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -0.2 +0.3 -0.4 -0.2
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.5 +0.4 +0.2 -0.2 -0.0
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 -0.6 +0.3 +0.4 -0.4
phage AgroPhage_F10 +0.3 -0.5 +0.6 -0.2 -0.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 -0.1 +0.5 +0.4 +0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 -0.4 +0.4 +0.3 -0.2
carbon source D-Sorbitol (C) -0.3 +0.3 -0.1 +0.4 +0.1
phage AgroPhage_E10 +0.6 -0.7 +0.3 +0.3 -0.0
phage phage 95.1 +0.6 -0.3 +0.1 +0.4 -0.3
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.6 -0.4 -0.1 +0.5 +0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.0 +0.1 +0.6 -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.8 -0.4 +0.4 +0.7 +0.4
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