Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3365 and Atu8094 are separated by 42 nucleotidesAtu8094 and Atu3366 are separated by 394 nucleotidesAtu3366 and Atu3367 are separated by 32 nucleotidesAtu3367 and Atu3368 are separated by 388 nucleotides Atu3365: Atu3365 - hypothetical protein, at 404,740 to 405,300 Atu3365 Atu8094: Atu8094 - hypothetical protein, at 405,343 to 405,588 Atu8094 Atu3366: Atu3366 - tripartite ATP-independent periplasmic transporter DctQ, at 405,983 to 406,522 Atu3366 Atu3367: Atu3367 - TRAP dicarboxylate transporter subunit DctM, at 406,555 to 408,024 Atu3367 Atu3368: Atu3368 - periplasmic mannitol-binding protein, at 408,413 to 409,510 Atu3368
Group Condition Atu3365 Atu8094 Atu3366 Atu3367 Atu3368
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 -2.8 +0.1 -0.2 -0.5
phage AgroPhage_A07 +0.2 -1.8 -0.5 +0.0 +0.0
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 -2.6 -0.0 +0.5 -0.0
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -1.0 -0.5 +0.1 -0.0
phage AgroPhage_C10 +0.0 -0.3 -0.2 -0.4 -0.6
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.7 -0.5 -0.6 +0.2
phage AgroPhage_A05 -0.2 -0.9 -0.5 +0.1 +0.0
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.4 -0.3 -0.9 -0.8
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.7 +0.4 -0.3 -0.4
carbon source Methyl-B-D-galactopyranoside (C) +0.3 -0.7 -0.4 -0.2 -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -0.8 -0.3 -0.0 +0.0
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 +0.8 -0.4 -0.4 +0.1
phage AgroPhage_C04 +0.1 +0.6 -0.0 -0.2 -1.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.6 +0.5 -0.3 -0.4 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 -0.8 +0.5 +0.2 +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -1.1 +0.8 -0.3 +0.4
phage AgroPhage_E04 -0.8 +0.6 +0.1 +0.0 -0.0
in planta Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.7 -0.1 -0.2 -0.4
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.4 -0.3 +0.4 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +0.3 +0.2 -0.3 -0.5
carbon source D-Saccharic potassium salt (C) -0.6 +0.7 +0.1 +0.2 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.7 -0.2 +0.2 -0.3
phage AgroPhage_E10 -0.1 -0.8 +0.5 +0.5 +0.6
stress R2A with Vancomycin 0.009 mM -0.5 +1.4 -0.2 +0.2 -0.2
phage phage 95.1 -0.5 +0.7 -0.2 +0.2 +0.6
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.6 +0.0 +0.4 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.8 +0.3 -0.3 -0.0
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +1.4 +0.5 +0.1 -0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +1.4 +0.2 +0.1 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +1.1 -0.1 +0.0 +0.8
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