Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3353 and Atu3354 are separated by 280 nucleotidesAtu3354 and Atu3355 are separated by 422 nucleotidesAtu3355 and Atu3356 are separated by 160 nucleotidesAtu3356 and Atu3357 are separated by 254 nucleotides Atu3353: Atu3353 - mannose-1-phosphate guanylyltransferase, at 387,134 to 388,564 Atu3353 Atu3354: Atu3354 - pyrroloquinoline-quinone-dependent quinate dehydrogenase, at 388,845 to 391,253 Atu3354 Atu3355: Atu3355 - LysR family transcriptional regulator, at 391,676 to 392,575 Atu3355 Atu3356: Atu3356 - malic enzyme, at 392,736 to 395,024 Atu3356 Atu3357: Atu3357 - amino acid ABC transporter substrate-binding protein, at 395,279 to 396,118 Atu3357
Group Condition Atu3353 Atu3354 Atu3355 Atu3356 Atu3357
stress R2A with Polymyxin B sulfate 0.00075 mM -7.2 -0.1 -0.1 +0.0 +0.1
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -6.6 +0.1 -0.4 -0.0 +0.2
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -6.3 -0.0 -0.1 -0.2 +0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -6.6 +0.2 -0.1 +0.4 -0.2
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -6.5 +0.0 -0.1 +0.2 +0.0
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -6.2 +0.0 +0.0 -0.1 -0.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -5.8 -0.1 -0.2 -0.2 +0.0
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -6.1 -0.0 +0.1 +0.0 +0.0
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -6.0 +0.1 -0.2 +0.2 -0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -5.6 -0.1 -0.1 -0.1 -0.0
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -5.5 -0.1 -0.3 -0.1 +0.1
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -5.9 +0.0 +0.0 -0.1 +0.3
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -6.2 -0.0 +0.3 +0.3 -0.0
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -5.4 -0.0 +0.0 -0.1 -0.1
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -5.5 -0.0 -0.0 -0.1 -0.0
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -5.1 -0.1 -0.3 -0.1 +0.0
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -5.3 +0.1 -0.0 -0.0 -0.2
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -5.3 -0.2 +0.0 -0.1 -0.0
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -5.4 +0.0 -0.1 +0.0 -0.0
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -5.7 +0.1 +0.2 +0.1 -0.2
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -5.0 -0.2 +0.1 -0.2 -0.0
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -5.3 +0.3 -0.1 -0.0 -0.2
in planta Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -5.2 +0.1 +0.1 +0.0 -0.1
in planta Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -4.8 -0.1 +0.4 +0.1 -0.2
phage Phage 95.3 + bacteria +6.7 -0.1 -0.2 -0.1 -0.1
phage Phage 95.3 + bacteria +7.7 +0.0 -0.3 -0.0 -0.2
phage Phage 95.3 + bacteria +7.4 +0.1 -0.1 +0.1 -0.0
phage AgroPhage_C10 +8.1 -0.1 -0.0 -0.3 -0.1
phage AgroPhage_C04 +7.5 -0.0 +0.1 +0.2 +0.1
phage phage 95.1 +8.2 -0.0 -0.0 -0.0 -0.1
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