Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3351 and Atu3352 are separated by 143 nucleotidesAtu3352 and Atu3353 are separated by 304 nucleotidesAtu3353 and Atu3354 are separated by 280 nucleotidesAtu3354 and Atu3355 are separated by 422 nucleotides Atu3351: Atu3351 - sugar ABC transporter permease, at 384,551 to 385,453 Atu3351 Atu3352: Atu3352 - sugar ABC transporter substrate-binding protein, at 385,597 to 386,829 Atu3352 Atu3353: Atu3353 - mannose-1-phosphate guanylyltransferase, at 387,134 to 388,564 Atu3353 Atu3354: Atu3354 - pyrroloquinoline-quinone-dependent quinate dehydrogenase, at 388,845 to 391,253 Atu3354 Atu3355: Atu3355 - LysR family transcriptional regulator, at 391,676 to 392,575 Atu3355
Group Condition Atu3351 Atu3352 Atu3353 Atu3354 Atu3355
carbon source Lactulose (C) -4.4 -3.8 -0.2 +0.1 -0.0
carbon source Lactulose (C) -3.7 -4.0 -0.4 -0.0 -0.1
carbon source Lactitol (C) -3.8 -4.2 -0.1 +0.1 +0.1
stress R2A with Polymyxin B sulfate 0.00075 mM -0.0 +0.1 -7.2 -0.1 -0.1
carbon source Lactitol (C) -3.4 -4.0 -0.0 +0.1 +0.1
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.1 -6.6 +0.2 -0.1
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.1 -6.6 +0.1 -0.4
carbon source Lactulose (C) -2.7 -2.6 -1.1 -0.1 -0.0
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -0.3 -5.8 -0.1 -0.2
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 -0.2 -6.2 +0.0 +0.0
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 +0.2 -6.3 -0.0 -0.1
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.0 -6.5 +0.0 -0.1
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -0.3 -6.2 -0.0 +0.3
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 -0.2 -5.5 -0.1 -0.3
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.1 -5.6 -0.1 -0.1
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.0 -5.5 -0.0 -0.0
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -0.1 -5.9 +0.0 +0.0
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.2 -5.4 -0.0 +0.0
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.0 -6.1 -0.0 +0.1
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.1 -6.0 +0.1 -0.2
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -0.1 -5.1 -0.1 -0.3
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.2 -5.3 +0.1 -0.0
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.0 -5.3 +0.3 -0.1
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.1 -5.7 +0.1 +0.2
phage Phage 95.3 + bacteria -0.2 -0.1 +6.7 -0.1 -0.2
phage Phage 95.3 + bacteria -0.1 -0.1 +7.4 +0.1 -0.1
phage Phage 95.3 + bacteria +0.1 +0.0 +7.7 +0.0 -0.3
phage AgroPhage_C04 +0.1 +0.0 +7.5 -0.0 +0.1
phage AgroPhage_C10 -0.1 -0.0 +8.1 -0.1 -0.0
phage phage 95.1 +0.5 +0.0 +8.2 -0.0 -0.0
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