Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3321 and Atu3322 are separated by 620 nucleotidesAtu3322 and Atu3323 are separated by 8 nucleotidesAtu3323 and Atu3324 are separated by 83 nucleotidesAtu3324 and Atu3325 overlap by 4 nucleotides Atu3321: Atu3321 - hypothetical protein, at 352,131 to 354,152 Atu3321 Atu3322: Atu3322 - ABC transporter permease, at 354,773 to 356,428 Atu3322 Atu3323: Atu3323 - HlyD family secretion protein, at 356,437 to 357,795 Atu3323 Atu3324: Atu3324 - hypothetical protein, at 357,879 to 358,373 Atu3324 Atu3325: Atu3325 - exopolysaccharide production protein, at 358,370 to 359,638 Atu3325
Group Condition Atu3321 Atu3322 Atu3323 Atu3324 Atu3325
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -0.1 -0.4 -0.9 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.1 -0.6 -0.7 N.D.
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.1 -0.6 -0.4 N.D.
phage AgroPhage_F03 -0.1 +0.2 -0.5 -0.6 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.5 -0.2 -1.0 N.D.
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 -0.2 -0.2 -0.7 N.D.
phage AgroPhage_F10 -0.2 +0.2 -0.1 -0.9 N.D.
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 +0.3 +0.3 -1.5 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.2 -0.1 +0.3 -0.7 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.2 -0.4 -0.4 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.0 +0.5 -0.2 -0.5 N.D.
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.2 -0.3 +0.7 N.D.
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.3 +0.6 -0.8 N.D.
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.3 -0.4 -0.2 +0.8 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 -0.0 -0.5 +0.6 N.D.
stress Chloramphenicol 12.5 ug/mL -0.1 -0.2 -0.3 +0.7 N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.4 -0.4 +0.8 N.D.
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 -0.3 -0.1 +0.7 N.D.
in planta Bethi_Library_OD0.01 -0.1 +0.2 -0.3 +0.6 N.D.
stress Chloramphenicol 12.5 ug/mL -0.1 -0.3 -0.1 +1.0 N.D.
phage AgroPhage_E10 -0.3 +0.1 +0.4 +0.5 N.D.
phage AgroPhage_A07 +0.1 +0.3 +0.5 -0.3 N.D.
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 +0.3 +0.0 +0.7 N.D.
Atjh14 +0.4 -0.1 +0.8 -0.2 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 +0.4 +0.2 +0.5 N.D.
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.0 +0.4 +0.4 N.D.
Atjh2 +0.2 +0.1 +0.1 +0.9 N.D.
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.2 +0.2 +1.1 N.D.
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.7 +0.1 +1.1 N.D.
nitrogen source DL-2-Aminobutyric (N) +0.2 +0.1 +0.3 +2.3 N.D.
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