Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3269 and Atu3270 are separated by 59 nucleotidesAtu3270 and Atu3271 are separated by 136 nucleotidesAtu3271 and Atu3272 are separated by 476 nucleotidesAtu3272 and Atu3273 are separated by 266 nucleotides Atu3269: Atu3269 - dipeptide ABC transporter substrate-binding protein, at 288,288 to 289,814 Atu3269 Atu3270: Atu3270 - hypothetical protein, at 289,874 to 290,116 Atu3270 Atu3271: Atu3271 - glycosyltransferase, at 290,253 to 291,377 Atu3271 Atu3272: Atu3272 - exopolysaccharide export protein, at 291,854 to 293,050 Atu3272 Atu3273: Atu3273 - HlyD family secretion protein, at 293,317 to 294,594 Atu3273
Group Condition Atu3269 Atu3270 Atu3271 Atu3272 Atu3273
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 -1.5 -0.4 +0.4 -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 -0.3 -0.8 -0.4 -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.9 -0.4 -0.0 -0.1
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -0.7 +0.0 -0.4 -0.5
phage AgroPhage_B01 -0.1 -1.0 -0.2 +0.0 -0.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.6 -0.4 -0.0 +0.2
phage AgroPhage_D04 -0.1 -0.7 -0.1 -0.4 +0.1
phage AgroPhage_E04 +0.1 -0.2 -0.5 -0.3 -0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 -1.1 +0.1 -0.0 +0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -1.1 -0.0 -0.0 +0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.4 -0.2 -0.2 +0.3
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -0.4 -0.3 -0.4 +0.4
in planta Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.6 -0.2 -0.1 +0.6
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.1 +0.1 +0.0 -1.0
stress R2A with tungstate 375 mM +0.3 -0.8 -0.1 +0.1 +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -0.6 -0.2 +0.5 +0.1
nitrogen source DL-2-Aminobutyric (N) +0.8 -0.7 -0.1 -0.1 +0.0
phage Phage 95.3 + bacteria +0.6 -0.2 -0.2 +0.2 -0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.4 +0.4 -0.2 +0.6
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 -0.2 -0.3 +0.3 +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.6 -0.4 +0.5 -0.3 +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.7 -0.3 +0.2 -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.5 +0.5 +0.0 -0.3
phage AgroPhage_C04 +0.6 +0.3 +0.3 -0.3 -0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 +0.5 -0.0 -0.2 +0.6
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.6 -0.4 +0.4 +0.3
phage AgroPhage_C10 +0.3 -0.1 +0.3 +0.7 -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.1 +0.9 -0.1 +0.2 +0.0
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.8 +0.2 +0.0 +0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.4 +0.3 +0.3 +0.1 +0.3
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