Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3259 and Atu3260 are separated by 53 nucleotidesAtu3260 and Atu3261 are separated by 16 nucleotidesAtu3261 and Atu3262 are separated by 100 nucleotidesAtu3262 and Atu3263 are separated by 55 nucleotides Atu3259: Atu3259 - dehydrogenase, at 275,818 to 277,329 Atu3259 Atu3260: Atu3260 - ABC transporter substrate binding protein, at 277,383 to 278,381 Atu3260 Atu3261: Atu3261 - ABC transporter permease, at 278,398 to 280,218 Atu3261 Atu3262: Atu3262 - ABC transporter permease, at 280,319 to 282,154 Atu3262 Atu3263: Atu3263 - L-seryl-tRNA(Ser) selenium transferase, at 282,210 to 283,406 Atu3263
Group Condition Atu3259 Atu3260 Atu3261 Atu3262 Atu3263
carbon source D-Glucuronic gamma lactone (C) -2.3 -0.0 +0.0 -0.0 -0.0
carbon source D-Glucuronic gamma lactone (C) -2.1 -0.0 -0.2 +0.0 -0.0
carbon source L-Arabinose (C) -2.0 -0.1 +0.0 -0.0 +0.0
carbon source L-Arabinose (C) -1.8 -0.1 +0.1 +0.1 -0.0
phage AgroPhage_D10 +0.2 -0.5 -0.1 -0.3 -0.4
nophagecontrol No phage control -0.4 -0.2 -0.4 -0.2 +0.0
carbon source D-Saccharic potassium salt (C) -1.1 -0.1 +0.0 +0.1 -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.4 -0.3 +0.1 -0.1
phage AgroPhage_C10 +0.3 -0.3 -0.8 +0.2 -0.3
carbon source D-Galacturonic Acid (C) -0.9 -0.1 +0.1 +0.1 -0.0
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.2 -0.2 +0.2 -0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.2 -0.2 +0.3 -0.2
phage AgroPhage_F03 +0.2 -0.2 +0.1 -0.4 -0.2
carbon source D-Saccharic potassium salt (C) -1.3 +0.1 +0.6 +0.1 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.4 +0.4 -0.4 +0.0
phage AgroPhage_F10 +0.0 -0.2 +0.5 -0.3 -0.3
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.2 -0.2 +0.2 +0.3
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.1 +0.3 +0.2 -0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 -0.2 -0.5 +0.3 +0.0
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.2 +0.2 +0.2 -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.3 +0.5 -0.2 +0.0
phage AgroPhage_E04 +0.4 -0.2 -0.2 +0.1 +0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.7 -0.3 -0.4 +0.1 +0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.3 +0.3 +0.2 -0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.3 +0.2 +0.2 -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 -0.4 +0.3 +0.1 +0.4
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.5 -0.2 +0.2 -0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 +0.5 +0.2 -0.1 +0.3
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.1 +0.5 +0.3 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 +0.4 +0.3 +0.3 +0.4
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