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Homologs
Fitness for 5 genes in
Agrobacterium fabrum C58
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500 nt
Atu3244 and Atu3245 are separated by 30 nucleotides
Atu3245 and Atu3246 are separated by 71 nucleotides
Atu3246 and Atu3247 are separated by 42 nucleotides
Atu3247 and Atu3248 overlap by 4 nucleotides
Atu3244: Atu3244 - diguanylate cyclase, at 261,692 to 264,010
Atu3244
Atu3245: Atu3245 - amino acid ABC transporter substrate-binding protein, at 264,041 to 264,934
Atu3245
Atu3246: Atu3246 - amino acid ABC transporter substrate-binding protein, at 265,006 to 265,908
Atu3246
Atu3247: Atu3247 - cell division topological specificity factor MinE, at 265,951 to 266,211
Atu3247
Atu3248: Atu3248 - cell division inhibitor, at 266,208 to 267,023
Atu3248
Group
Condition
Atu3244
Atu3245
Atu3246
Atu3247
Atu3248
in planta
Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.7
-0.0
-0.6
N.D.
-1.3
phage
AgroPhage_E10
+0.1
-0.0
-1.2
N.D.
-0.8
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
-0.3
-0.1
-1.3
N.D.
+0.1
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
-0.1
-0.2
-0.3
N.D.
-1.0
in planta
Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.3
-0.3
-0.3
N.D.
-0.8
in planta
Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days
+0.2
-0.3
-0.7
N.D.
-0.8
lb_sorghum x54 243
LB_Sorghum X54 243
-0.1
-0.1
-0.5
N.D.
-0.8
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.1
-0.3
-0.6
N.D.
-0.7
lb_sorghum b5 999
LB_Sorghum B5 999
+0.0
-0.2
-0.6
N.D.
-0.7
in planta
Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.2
-0.2
-0.3
N.D.
-0.8
in planta
Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.3
-0.4
+0.8
N.D.
-1.5
in planta
Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.3
-0.2
+0.1
N.D.
-1.4
in planta
Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days
+0.2
-0.0
-0.6
N.D.
-0.8
in planta
Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.1
+0.1
-0.3
N.D.
-1.1
in planta
Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.1
+0.2
-0.1
N.D.
-1.3
in planta
Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.2
-0.4
+0.1
N.D.
-0.9
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.1
-0.4
+0.3
N.D.
-0.8
in planta
Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.1
+0.2
-0.6
N.D.
-0.6
lb
LB
+0.3
+0.0
-0.4
N.D.
-0.7
in planta
Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days
+0.2
+0.1
-0.6
N.D.
-0.6
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.1
+0.3
-0.5
N.D.
-0.8
in planta
Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.3
-0.3
-0.2
N.D.
-0.6
in planta
Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.2
+0.2
-0.4
N.D.
-0.7
in planta
Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.3
-0.3
+1.3
N.D.
-1.3
in planta
Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
+0.0
-0.1
+0.9
N.D.
-0.7
nitrogen source
DL-2-Aminobutyric (N)
+0.3
-0.3
+0.5
N.D.
-0.4
in planta
Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct
-0.0
-0.4
+0.9
N.D.
-0.3
in planta
Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct
+0.5
+0.4
-0.4
N.D.
-0.3
in planta
Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days
+0.1
-0.0
+1.1
N.D.
-0.9
stress
R2A with Vancomycin 0.009 mM
+0.1
-0.1
-0.1
N.D.
+1.2
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