Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3230 and Atu8184 are separated by 157 nucleotidesAtu8184 and Atu3232 overlap by 4 nucleotidesAtu3232 and Atu8185 are separated by 104 nucleotidesAtu8185 and Atu3234 are separated by 111 nucleotides Atu3230: Atu3230 - hypothetical protein, at 247,037 to 247,801 Atu3230 Atu8184: Atu8184 - hypothetical protein, at 247,959 to 248,372 Atu8184 Atu3232: Atu3232 - hydroxypyruvate reductase, at 248,369 to 249,649 Atu3232 Atu8185: Atu8185 - hypothetical protein, at 249,754 to 250,017 Atu8185 Atu3234: Atu3234 - NAD binding oxidoreductase, at 250,129 to 251,316 Atu3234
Group Condition Atu3230 Atu8184 Atu3232 Atu8185 Atu3234
carbon source methyl-alpha-D-xylopyranoside (C) -0.1 -0.4 -0.2 -0.0 -2.4
carbon source methyl-beta-D-xylopyranoside (C) -0.3 -0.4 -0.1 +0.1 -2.5
carbon source methyl-beta-D-xylopyranoside (C) -0.0 +0.1 -0.2 -0.0 -2.4
phage AgroPhage_D10 -0.0 +0.0 -0.2 -1.9 +0.1
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -1.4 +0.5 -0.8 -0.1
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.0 -0.8 -0.1 -0.6 -0.4
carbon source L-Sorbose (C) -0.2 -0.4 -1.2 -0.1 +0.0
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 -0.9 -0.1 -0.4 +0.1
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 +0.5 -0.6 -0.3 -0.4
carbon source methyl-alpha-D-xylopyranoside (C) +0.2 +0.1 +0.1 +0.1 -2.1
carbon source methyl-beta-D-xylopyranoside (C) +0.0 +0.2 +0.0 +0.1 -2.0
carbon source methyl-beta-D-xylopyranoside (C) +0.1 +0.3 +0.2 -0.1 -1.7
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 -0.5 -0.2 -0.2 +0.5
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -1.1 +0.0 -0.0 +0.7
nitrogen source DL-2-Aminobutyric (N) +0.5 -0.8 +0.6 +0.2 -0.9
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 +0.6 +0.5 -0.7 -0.1
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.9 +0.5 -0.2 +0.4 +0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.8 +0.1 +0.4 +0.5
phage AgroPhage_C10 -0.6 +0.2 +0.1 +1.0 -0.5
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.5 +0.2 +0.6 +0.2
phage AgroPhage_F04 -0.4 +0.7 +0.5 -0.4 -0.0
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +0.5 -0.1 -0.6 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.2 -0.0 +0.2 -0.5 -0.4
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +1.4 -0.4 +0.2 -0.3 +0.2
phage AgroPhage_E04 -0.4 +0.8 -0.2 +0.5 +0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.1 +0.4 +1.0 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.1 +1.4 -0.2 +0.1 +0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +0.4 +0.7 -0.1 +0.1
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.2 +0.9 +0.4 +0.4 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 +1.4 +0.6 +0.7 +0.2
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