Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3227 and Atu3228 are separated by 7 nucleotidesAtu3228 and Atu3229 overlap by 4 nucleotidesAtu3229 and Atu3230 are separated by 13 nucleotidesAtu3230 and Atu8184 are separated by 157 nucleotides Atu3227: Atu3227 - AraC family transcriptional regulator, at 241,387 to 242,325 Atu3227 Atu3228: Atu3228 - DNA polymerase III subunit alpha, at 242,333 to 245,608 Atu3228 Atu3229: Atu3229 - hypothetical protein, at 245,605 to 247,023 Atu3229 Atu3230: Atu3230 - hypothetical protein, at 247,037 to 247,801 Atu3230 Atu8184: Atu8184 - hypothetical protein, at 247,959 to 248,372 Atu8184
Group Condition Atu3227 Atu3228 Atu3229 Atu3230 Atu8184
in planta Plant=Maize; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 -0.2 +0.0 -0.4 -0.9
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 +0.0 -0.2 -0.5 -0.7
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.2 -0.1 -0.4 -0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.2 +0.0 -0.0 -0.4 -0.8
phage AgroPhage_D04 -0.1 +0.1 -0.4 +0.0 -0.8
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.2 -0.1 -0.3 -1.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.3 -0.6 +0.2 -0.5
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.3 +0.1 -0.5 -0.4
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.1 +0.2 -0.1 -1.0
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.0 -0.2 -0.9 +0.5
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.1 -0.1 -0.6 -0.5
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.0 -0.1 -0.8 +0.5
nitrogen source DL-2-Aminobutyric (N) -0.5 +0.2 +0.2 +0.5 -0.8
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.9 +0.4 +0.1 -0.1 -1.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.3 -0.1 +0.1 -0.4 +0.6
phage AgroPhage_C10 +0.5 -0.1 +0.1 -0.6 +0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.1 -0.1 -0.5 +0.4
phage AgroPhage_E10 +0.4 -0.1 -0.4 +0.1 +0.6
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.1 -0.2 -0.1 +1.4 -0.4
phage AgroPhage_E04 -0.1 +0.1 +0.3 -0.4 +0.8
phage AgroPhage_F04 +0.1 +0.4 +0.1 -0.4 +0.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.1 +0.3 +0.4 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.2 -0.2 +0.2 +0.5 +0.4
phage AgroPhage_H04 +0.2 +0.2 -0.1 -0.1 +0.9
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.1 -0.0 -0.1 -0.1 +1.4
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.3 +0.1 +0.1 -0.0 +0.8
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.1 +0.1 +1.2 -0.0
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.1 +0.4 +0.0 +0.2 +0.9
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.6 +0.2 +0.3 +0.2 +0.5
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +0.1 +0.4 +0.1 +1.4
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