Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3192 and Atu3193 are separated by 69 nucleotidesAtu3193 and Atu3194 are separated by 146 nucleotidesAtu3194 and Atu3196 are separated by 250 nucleotidesAtu3196 and Atu3197 are separated by 536 nucleotides Atu3192: Atu3192 - MFS permease, at 201,516 to 202,811 Atu3192 Atu3193: Atu3193 - MarR family transcriptional regulator, at 202,881 to 203,282 Atu3193 Atu3194: Atu3194 - acetyltransferase, at 203,429 to 203,998 Atu3194 Atu3196: Atu3196 - ornithine decarboxylase, at 204,249 to 205,382 Atu3196 Atu3197: Atu3197 - LysR family transcriptional regulator, at 205,919 to 206,812 Atu3197
Group Condition Atu3192 Atu3193 Atu3194 Atu3196 Atu3197
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.3 -0.5 N.D. -0.4
stress R2A with m-arsenite 0.8 mM -0.3 -0.3 -0.3 N.D. -0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.9 -0.3 N.D. +0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.3 -1.0 N.D. -0.1
nitrogen source DL-2-Aminobutyric (N) +0.3 -0.5 -0.4 N.D. +0.1
stress R2A with Nitrofurantoin 0.4 mg/mL +0.3 -0.5 -0.3 N.D. +0.2
phage AgroPhage_C04 -0.2 +0.4 -0.2 N.D. -0.5
phage AgroPhage_D04 -0.1 +0.5 -0.3 N.D. -0.3
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.2 -0.4 -0.3 N.D. +0.3
phage phage 95.1 +0.1 -0.7 +0.6 N.D. +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Cocuture=C58C1OD2.0 -0.4 +0.5 +0.3 N.D. -0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 +0.1 +0.7 N.D. -0.5
lb_benthi_root LB_Benthi_root +0.3 +0.4 +0.2 N.D. -0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.5 +0.2 N.D. -0.5
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.4 +0.7 N.D. +0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 +0.8 +0.3 N.D. -0.4
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 -0.3 +0.4 N.D. -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.7 -0.0 N.D. -0.3
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.4 +0.6 N.D. -0.2
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.5 +0.7 N.D. -0.1
phage AgroPhage_H04 +0.4 +0.4 +0.3 N.D. -0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 +0.2 +0.5 N.D. -0.1
stress R2A with G418 disolution 0.02 mM +0.3 +0.5 +0.4 N.D. -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +1.2 +0.1 N.D. -0.2
stress R2A with Kanamycin sulfate 0.02 mM +0.2 +0.8 +0.3 N.D. +0.0
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 +0.7 +0.6 N.D. +0.0
stress R2A with Vancomycin 0.009 mM +0.4 +0.6 +0.8 N.D. -0.2
pH R2A pH 5.5 -0.1 +1.2 +0.6 N.D. -0.0
pH R2A pH 5.5 +0.2 +1.0 +0.7 N.D. -0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.7 +1.7 +0.3 N.D. -0.2
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