Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3189 and Atu3190 are separated by 321 nucleotidesAtu3190 and Atu3191 are separated by 209 nucleotidesAtu3191 and Atu3192 are separated by 273 nucleotidesAtu3192 and Atu3193 are separated by 69 nucleotides Atu3189: Atu3189 - hypothetical protein, at 198,838 to 199,581 Atu3189 Atu3190: Atu3190 - hypothetical protein, at 199,903 to 200,346 Atu3190 Atu3191: Atu3191 - outer membrane protein, at 200,556 to 201,242 Atu3191 Atu3192: Atu3192 - MFS permease, at 201,516 to 202,811 Atu3192 Atu3193: Atu3193 - MarR family transcriptional regulator, at 202,881 to 203,282 Atu3193
Group Condition Atu3189 Atu3190 Atu3191 Atu3192 Atu3193
phage AgroPhage_E04 -0.7 +0.1 -0.6 -0.3 -0.0
nophagecontrol No phage control -0.4 -0.2 -0.8 -0.0 -0.1
phage AgroPhage_H03 -0.3 +0.4 -1.5 +0.0 -0.1
phage AgroPhage_D07 -0.1 +0.2 -0.5 -0.2 -0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.7 -0.3 +0.0 +0.3 -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -0.4 +0.5 -0.2 -0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.7 -0.3 +0.1 +0.3 +0.2
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.4 +0.2 +0.3 -0.6
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.7 -0.6 +0.8 +0.5 -0.3
phage AgroPhage_D10 -0.7 +0.3 +0.2 +0.5 -0.2
phage AgroPhage_C10 +0.2 -0.4 +1.0 -0.0 -0.7
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.3 +0.5 +0.1 -0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.5 +0.0 +0.0 +0.2 +0.7
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -0.5 +0.3 -0.1 +0.3 +0.6
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.5 +0.2 -0.0 +0.3 +0.7
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -0.3 +0.4 -0.2 +0.2 +0.7
pH R2A pH 5.5 -0.2 +0.2 -0.1 -0.1 +1.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 +0.2 +0.4 +0.3 +0.3
pH R2A pH 5.5 -0.3 +0.0 +0.0 +0.2 +1.0
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.6 +0.5 +0.4 -0.0 +0.8
in planta Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 +0.3 +0.2 +0.3 +0.4
phage AgroPhage_C04 +0.1 -0.3 +1.0 -0.2 +0.4
phage AgroPhage_H04 -0.3 +0.4 +0.1 +0.4 +0.4
stress R2A with Kanamycin sulfate 0.02 mM +0.0 +0.3 -0.3 +0.2 +0.8
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.6 -0.2 +0.4 +0.5
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.3 +0.2 -0.0 +0.8
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.0 +0.3 +0.9 +0.2 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.1 +0.3 -0.1 +0.2 +1.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.1 +0.2 +0.7 +0.2 +0.7
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 +0.2 -0.6 +0.7 +1.7
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