Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 1003 experiments or choose conditions or try the comparative fitness browser

500 ntAtu3180 and Atu3181 are separated by 300 nucleotidesAtu3181 and Atu3182 are separated by 78 nucleotidesAtu3182 and Atu3183 are separated by 97 nucleotidesAtu3183 and Atu3184 overlap by 4 nucleotides Atu3180: Atu3180 - ABC transporter permease, at 189,910 to 190,743 Atu3180 Atu3181: Atu3181 - hypothetical protein, at 191,044 to 192,246 Atu3181 Atu3182: Atu3182 - hypothetical protein, at 192,325 to 192,762 Atu3182 Atu3183: Atu3183 - hypothetical protein, at 192,860 to 193,129 Atu3183 Atu3184: Atu3184 - hypothetical protein, at 193,126 to 194,169 Atu3184
Group Condition Atu3180 Atu3181 Atu3182 Atu3183 Atu3184
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.3 +0.4 -4.4 -0.3
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.2 -0.6 -4.2 +0.4
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.2 -0.1 -3.9 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 +0.3 -1.1 -2.3 -0.1
phage AgroPhage_C10 -0.2 -0.4 +0.3 -3.4 -0.1
stress R2A with m-arsenite 0.8 mM -2.5 +0.0 -0.1 -1.0 +0.0
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 -0.1 +0.3 -2.1 -0.6
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.2 -1.1 -1.7 +0.1
no phage P4L5 -0.6 +0.1 -0.4 -2.5 +0.2
phage AgroPhage_E04 +0.2 +0.1 -0.0 -3.5 +0.0
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.3 +0.2 +0.1 -2.9 -0.2
stress R2A with Vancomycin 0.009 mM -0.2 -0.3 +0.5 -3.2 +0.1
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.0 -0.2 -0.2 -2.7 +0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.8 -0.0 +0.8 -2.6 -0.4
stress Chloramphenicol 12.5 ug/mL +0.6 -0.1 -1.8 -1.3 -0.4
carbon source D-(+)-melezitose (C) +0.0 -0.4 +0.1 -2.3 -0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -0.2 -0.0 -2.6 -0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.2 -0.5 -0.9 -1.1 +0.2
stress R2A with tungstate 375 mM -0.2 +0.1 +0.2 -2.2 +0.2
carbon source D-Saccharic potassium salt (C) +0.1 -0.0 +0.7 -2.5 +0.0
phage AgroPhage_E10 -0.5 -0.1 -2.7 +1.1 +0.4
phage AgroPhage_F04 +0.3 -0.0 -2.1 +0.4 -0.2
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.4 +0.2 +0.6 -2.5 -0.2
carbon source D-Sorbitol (C) +0.3 -0.1 +0.4 -2.0 +0.1
stress R2A with m-arsenite 0.8 mM -2.1 +0.0 -0.1 +0.9 +0.1
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.1 -0.7 -1.3 +0.4
phage AgroPhage_C04 +0.1 -0.2 -1.5 +0.7 +0.3
no phage P2L5 -0.8 +0.1 -0.5 +1.2 +0.3
phage phage 95.1 -0.4 +0.0 -0.6 +2.0 -0.3
in planta Plant=Sorghum_NK_300; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.5 +0.1 +1.8 +0.4
remove
Atu3180
plot		 remove
Atu3181
plot		 remove
Atu3182		 remove
Atu3183
plot		 remove
Atu3184
plot