Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3168 and Atu3169 are separated by 12 nucleotidesAtu3169 and Atu3170 are separated by 12 nucleotidesAtu3170 and Atu3171 are separated by 10 nucleotidesAtu3171 and Atu3172 are separated by 4 nucleotides Atu3168: Atu3168 - sorbitol/mannitol ABC transporter permease, at 178,224 to 179,096 Atu3168 Atu3169: Atu3169 - sorbitol/mannitol ABC transporter permease, at 179,109 to 179,933 Atu3169 Atu3170: Atu3170 - sorbitol/mannitol ABC transporter ATPase, at 179,946 to 180,944 Atu3170 Atu3171: Atu3171 - sugar ABC transporter ATPase, at 180,955 to 182,031 Atu3171 Atu3172: Atu3172 - sugar ABC transporter permease, at 182,036 to 182,866 Atu3172
Group Condition Atu3168 Atu3169 Atu3170 Atu3171 Atu3172
phage AgroPhage_C10 -0.5 -1.1 -0.3 +0.1 -0.6
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.4 -0.7 -0.6 +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.0 -1.3 -0.4 -0.0 +0.0
phage Phage 95.3 + bacteria -0.4 -0.8 -0.1 -0.0 -0.2
phage Phage 97.2 + bacteria -0.4 -0.6 -0.3 -0.1 -0.2
phage AgroPhage_D10 -0.5 -0.0 +0.1 -0.3 -0.7
phage Phage 95.3 + bacteria -0.2 -1.3 +0.1 +0.0 -0.1
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.7 -0.1 -0.5 -0.1
phage AgroPhage_D07 -0.1 -0.7 -0.4 +0.2 -0.2
carbon source D-Sorbitol (C) +0.2 -0.6 +0.3 -0.3 -0.2
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.5 -0.2 -0.6 +0.4
phage AgroPhage_F04 +0.2 -0.6 +0.3 -0.2 -0.2
stress R2A with m-arsenite 0.8 mM -0.2 +0.6 +0.1 -0.5 -0.2
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 -0.7 +0.1 +0.2 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -0.6 -0.1 +1.1 -0.0
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.5 -0.6 -0.0 +0.6 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 +0.8 +0.0 +0.2 -0.4
stress R2A with Vancomycin 0.009 mM +0.1 +0.8 -0.2 +0.1 -0.2
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 +0.2 -0.0 +0.5 +0.5
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days +0.3 +0.5 +0.3 +0.2 -0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.8 -0.2 +0.2 +0.2 +0.1
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.1 +0.2 -0.1 +0.8
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.7 +0.4 -0.1 -0.1
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.2 +0.0 -0.1 +0.0 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 -0.4 +0.3 +1.3 -0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 +0.7 +0.3 +0.3 -0.1
in planta Plant=Arabidopsis_efr; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 +0.8 +0.2 -0.1 +0.1
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +0.3 +0.4 +0.3 +0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 +0.7 +0.3 +0.2 +0.1
in planta Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 +0.8 +0.3 +0.4 +0.0
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