Fitness for 5 genes in Agrobacterium fabrum C58

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 953 experiments or choose conditions or try the comparative fitness browser

500 ntAtu3163 and Atu3164 are separated by 16 nucleotidesAtu3164 and Atu3165 are separated by 259 nucleotidesAtu3165 and Atu3166 are separated by 379 nucleotidesAtu3166 and Atu3167 overlap by 4 nucleotides Atu3163: Atu3163 - zinc-binding dehydrogenase, at 172,147 to 173,157 Atu3163 Atu3164: Atu3164 - sorbitol dehydrogenase, at 173,174 to 173,944 Atu3164 Atu3165: Atu3165 - sorbitol/mannitol ABC transporter substrate-binding protein, at 174,204 to 175,457 Atu3165 Atu3166: Atu3166 - fructokinase, at 175,837 to 176,826 Atu3166 Atu3167: Atu3167 - tagatose 6-phosphate kinase, at 176,823 to 178,100 Atu3167
Group Condition Atu3163 Atu3164 Atu3165 Atu3166 Atu3167
phage AgroPhage_F10 -0.4 -0.3 -0.2 -0.5 -0.3
carbon source Lactitol (C) -0.1 -0.5 -0.2 -0.1 -0.4
phage AgroPhage_D10 +0.1 -0.6 -0.5 -0.2 -0.2
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.4 -0.3 -0.5 +0.0
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.7 -0.1 -0.1 -0.5 -0.1
carbon source Lactitol (C) -0.1 -0.5 -0.3 +0.0 -0.5
phage AgroPhage_B07 -0.4 -0.2 -0.1 -0.4 -0.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days -0.5 -0.4 -0.1 -0.2 -0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -0.3 -0.3 +0.0 -0.5 -0.2
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -0.6 -0.2 +0.0 -0.4 -0.1
phage AgroPhage_E04 -0.0 -0.3 -0.3 -0.5 -0.3
phage AgroPhage_C04 -0.5 -0.4 -0.0 -0.5 +0.1
phage AgroPhage_H10 -0.4 +0.0 -0.2 -0.4 -0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 -0.4 +0.0 -0.4 +0.1
carbon source Lactulose (C) +0.0 -0.0 +0.1 -0.4 -0.7
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.1 -0.8 +0.1 -0.4 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -0.5 +0.1 -0.4 -0.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.4 +0.2 -0.4 +0.1
carbon source D-Galacturonic Acid (C) +0.1 +0.1 +0.0 -0.8 -0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.2 -0.1 -0.5 +0.3
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 -0.4 +0.4 -0.2 -0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 -0.2 +0.0 -0.5 -0.1
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.4 -0.3 +0.1 -0.2 +0.3
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 +0.3 -0.3 +0.2 -0.4
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.4 +0.2 +0.0 +0.4 -0.3
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 -0.1 +0.2 +0.1 +0.3
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.7 +0.2 +0.3 -0.2 +0.3
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 +1.0 +0.6 +0.4 +0.3
carbon source D-Sorbitol (C) -0.1 -0.8 -0.4 +3.8 +0.1
carbon source D-Sorbitol (C) -0.1 -0.6 -0.2 +3.7 +0.2
remove
Atu3163
plot		 remove
Atu3164
plot		 remove
Atu3165		 remove
Atu3166
plot		 remove
Atu3167
plot