Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu3134	Atu3135	Atu3136	Atu3137	Atu3138
carbon source	D-Galacturonic Acid (C)	+0.1	-4.9	-4.3	-4.9	-7.2
carbon source	D-Galacturonic Acid (C)	+0.1	-5.0	-4.9	-5.0	-5.8
carbon source	Rhamnogalacturonan - from potato (C)	-2.4	-0.4	-0.3	-0.5	-3.3
carbon source	Rhamnogalacturonan - from potato (C)	-2.5	-0.4	-0.1	-0.7	-2.9
phage	AgroPhage_C04	+0.2	-0.3	-0.5	-0.6	-0.3
in planta	Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.2	-0.2	-0.1	-0.7	-0.3
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.7	+0.1	-0.6	-0.2	+0.1
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.2	+0.3	-0.7	-0.4	+0.3
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.4	-0.0	-0.5	+0.4	-0.2
stress	Chloramphenicol 12.5 ug/mL	+0.5	-0.1	-0.5	-0.2	-0.3
in planta	Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.3	+0.4	+0.1	-0.6	-0.1
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.4	+0.1	-0.5	-0.1	+0.4
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.2	+0.3	-0.6	-0.3	+0.5
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.2	+0.1	+0.5	-0.6	-0.0
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.1	+0.2	-0.8	+0.6	+0.2
stress	Chloramphenicol 12.5 ug/mL	+0.0	-0.1	+0.9	-0.2	-0.5
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.3	-0.2	+0.5	-0.3	-0.1
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.3	-0.1	+0.7	+0.2	-0.2
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.2	+0.1	-0.6	+0.4	+0.3
agar plate interaction control	Parafilmed volatile agar plate with no fungus	-0.3	+0.1	+0.6	-0.3	+0.5
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	-0.2	-0.0	+0.7	-0.2	+0.3
stress	R2A with Vancomycin 0.009 mM	-0.2	-0.4	+0.5	+0.5	+0.4
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.4	-0.4	+0.3	+0.5
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.5	+0.5	-0.4	+0.5	-0.2
agar plate interaction control	Parafilmed volatile agar plate with no fungus	+0.1	-0.1	-0.2	+0.6	+0.6
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.2	+0.0	+0.5	+0.7	-0.0
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.2	+0.3	+0.6	+0.1	-0.2
in planta	Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.2	+0.7	+0.4	-0.0
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.5	+0.4	+0.3	+0.2	+0.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.1	+0.1	+0.5	+0.4	+0.4