Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu3128	Atu3129	Atu3130	Atu3131	Atu3132
carbon source	Rhamnogalacturonan - from potato (C)	-1.3	-2.5	-2.0	-2.5	-1.7
carbon source	Rhamnogalacturonan - from potato (C)	-1.2	-2.0	-2.4	-2.5	-1.8
no phage	P4L5	-0.1	-0.2	-0.7	-0.1	-0.2
phage	AgroPhage_C04	-0.4	-0.2	-0.6	-0.0	+0.0
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.3	+0.1	-1.1	+0.3	-0.5
phage	phage 100.3	-0.2	+0.2	-0.4	-0.1	-0.2
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.1	-0.1	+0.4	-0.3	-0.6
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.3	-0.1	+0.4	-0.4	-0.2
nitrogen source	DL-2-Aminobutyric (N)	-0.2	+0.0	+0.6	-0.3	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	-0.3	+0.0	-0.4	+0.2	+0.3
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.2	+0.0	+0.5	-0.2	-0.3
in planta	Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.3	+0.4	-0.4	-0.1	+0.6
in planta	Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.1	-0.5	-0.0	+0.3	+0.6
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant	+0.3	+0.2	-0.4	-0.1	+0.5
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.3	+0.2	+0.5	+0.1	-0.2
in planta	Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.2	-0.1	+0.6	+0.2	-0.2
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.6	+0.2	-0.8	+0.5	+0.3
in planta	Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	-0.2	+0.4	+0.4	+0.3	+0.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.6	-0.0	+0.0	+0.5	-0.1
phage	AgroPhage_F04	+0.4	-0.2	+0.2	+0.2	+0.5
in planta	Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.3	+0.3	+0.2	-0.1	+0.5
carbon source	D-Galacturonic Acid (C)	+1.2	+0.1	-0.0	-0.1	+0.0
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.1	+0.3	+0.4	+0.3	+0.3
carbon source	D-Galacturonic Acid (C)	+1.2	+0.1	-0.2	-0.1	+0.2
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.3	+0.3	+0.3	+0.2	+0.4
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.9	+0.2	+0.2	-0.5	+0.6
stress	Pyrogallol 0.5 mM	+0.3	+0.4	+0.2	+0.3	+0.3
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.2	+0.3	+0.7	+0.1	+0.2
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.3	+0.4	+0.0	+0.7	+0.2
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.2	+0.1	+0.6	+0.2	+0.7