Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3116 and Atu3117 are separated by 10 nucleotidesAtu3117 and Atu3118 are separated by 24 nucleotidesAtu3118 and Atu3119 are separated by 18 nucleotidesAtu3119 and Atu3120 are separated by 21 nucleotides Atu3116: Atu3116 - oxidoreductase, at 126,031 to 127,152 Atu3116 Atu3117: Atu3117 - hypothetical protein, at 127,163 to 128,326 Atu3117 Atu3118: Atu3118 - hypothetical protein, at 128,351 to 129,172 Atu3118 Atu3119: Atu3119 - hypothetical protein, at 129,191 to 130,426 Atu3119 Atu3120: Atu3120 - hypothetical protein, at 130,448 to 130,945 Atu3120
Group Condition Atu3116 Atu3117 Atu3118 Atu3119 Atu3120
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 -0.2 -0.2 +0.1 -3.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.4 -0.2 -0.1 -0.0 -3.3
phage AgroPhage_C04 -0.1 -0.8 -0.2 +0.2 -2.2
stress R2A with sodium fluoride 0.2 mM -0.0 -0.1 -0.0 +0.1 -2.5
in planta Bethi_Library_OD0.05 -0.0 -0.1 +0.1 +0.1 -2.4
phage AgroPhage_A05 +0.1 +0.2 +0.1 -0.1 -2.4
stress Timentin 3.125 ug/mL -0.0 +0.3 -0.1 -0.1 -2.3
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.2 +0.2 -0.1 -0.1 -1.9
stress Chloramphenicol 12.5 ug/mL +0.3 -0.9 +0.4 -0.4 -1.4
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.0 +0.4 +0.1 +0.1 -2.6
lb_sorghum btx 430 LB_Sorghum Btx 430 -0.2 +0.0 -0.1 +0.2 -1.7
phage Phage 100.1 + bacteria +0.1 +0.1 +0.1 +0.1 -2.1
phage AgroPhage_A07 +0.1 -0.2 +0.3 -0.1 -1.8
r2a_control R2A control -0.3 +0.1 +0.1 -0.0 -1.8
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.3 -0.1 +0.2 +0.1 -1.7
phage AgroPhage_E10 +0.0 -0.0 +0.2 +0.1 -1.9
pH R2A pH 5.5 -0.1 +0.1 +0.3 +0.4 -1.5
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.4 +0.8 -0.3 +0.5 -1.3
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.4 +0.5 -0.1 -1.5
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 -0.1 +0.5 +0.2 -1.3
stress R2A with Vancomycin 0.009 mM +0.2 -0.6 +0.3 -0.3 +1.0
in planta Plant=Wheat; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.2 -0.2 +0.1 -0.2 +1.6
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.4 -0.1 -0.2 +0.4 +1.3
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days -0.3 -0.2 -0.2 +0.2 +1.7
in planta Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.1 -0.4 -0.0 -0.0 +1.9
phage AgroPhage_D04 +0.2 -0.2 +0.1 -0.0 +1.8
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct -0.2 +0.3 -0.2 +0.3 +1.9
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.6 +0.2 -0.3 +1.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.3 -0.2 +0.3 +0.6 +1.6
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.3 +0.4 +0.5 +1.5
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