Fitness for 5 genes in Agrobacterium fabrum C58

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	Atu3110	Atu3111	Atu3112	Atu3113	Atu3114
carbon source	Rhamnogalacturonan - from potato (C)	+0.1	-0.6	-0.5	-0.7	+0.0
phage	AgroPhage_H04	-1.1	-0.1	-0.1	+0.1	-0.2
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	-1.2	-0.2	+0.0	+0.1	-0.0
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days	-1.0	-0.0	-0.3	+0.1	+0.0
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=1days	-1.0	+0.1	-0.2	+0.1	-0.2
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	-1.1	+0.2	-0.3	+0.1	-0.1
in planta	Plant=Sorghum_F72_F505; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.4	+0.3	-0.3	-0.2	-0.4
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days	-0.9	+0.1	-0.1	+0.2	-0.3
in planta	Plant=Tobacco; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.9	+0.3	+0.1	-0.0	-0.2
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.5	+0.2	+0.0	+0.1	-0.5
phage	AgroPhage_D10	-0.8	-0.1	-0.3	+0.4	+0.6
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	-0.4	+0.2	+0.6	+0.0	-0.4
in planta	Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.3	+0.6	-0.0	+0.2	-0.8
phage	AgroPhage_E04	+0.1	-0.6	+0.1	-0.0	+0.7
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.6	+0.1	+0.1	+0.4	+0.4
in planta	Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.4	+0.3	+0.3	+0.1	-0.5
phage	AgroPhage_E10	-0.5	-0.0	+0.5	-0.0	+0.8
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	-0.3	+0.4	+0.3	+0.4	+0.2
in planta	Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	+0.5	-0.0	+0.2	+0.6	-0.3
agar plate interaction	Parafilmed volatile agar plate with Trichoderma atroviridae IMI	+0.6	+0.1	-0.1	-0.0	+0.7
nitrogen source	DL-2-Aminobutyric (N)	+0.7	+0.2	+0.0	-0.3	+0.6
in planta	Plant=Sorghum_X54_243; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.9	+0.4	-0.1	-0.2	+0.4
in planta	Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct	-0.3	+0.6	+0.3	+0.5	+0.4
lb_sorghum_leaf	LB_sorghum_leaf	+0.2	+0.3	+0.4	+0.3	+0.2
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.2	+0.1	+0.4	+0.4	+0.3
stress	R2A with Vancomycin 0.009 mM	+1.5	+0.1	-0.0	+0.0	-0.1
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.0	+0.3	+0.6	+0.3	+0.4
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.2	+0.3	+0.6	+0.3	+0.4
in planta	Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days	+0.1	+0.3	+0.6	+0.5	+0.5
in planta	Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct	+0.8	+0.7	+0.3	+0.5	-0.0