Fitness for 5 genes in Agrobacterium fabrum C58

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500 ntAtu3098 and Atu3099 are separated by 31 nucleotidesAtu3099 and Atu3100 are separated by 72 nucleotidesAtu3100 and Atu3101 overlap by 4 nucleotidesAtu3101 and Atu3102 are separated by 75 nucleotides Atu3098: Atu3098 - sn-glycerol-3-phosphate ABC transporter membrane protein, at 105,280 to 106,164 Atu3098 Atu3099: Atu3099 - glycerol-3-phosphate transporter ATP-binding subunit, at 106,196 to 107,317 Atu3099 Atu3100: Atu3100 - sugar ABC transporter permease, at 107,390 to 108,217 Atu3100 Atu3101: Atu3101 - sugar ABC transporter permease, at 108,214 to 109,092 Atu3101 Atu3102: Atu3102 - sugar ABC transporter substrate-binding protein, at 109,168 to 110,442 Atu3102
Group Condition Atu3098 Atu3099 Atu3100 Atu3101 Atu3102
in planta Plant=Sorghum_Btx_642; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.5 -0.5 -0.2 -0.3 +0.1
in planta Plant=Sorghum_Btx_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 -0.3 +0.4 -0.4 -0.2
stress Chloramphenicol 12.5 ug/mL -0.3 +0.4 +0.3 -0.2 -0.4
in planta Plant=Sorghum_B5_999; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.1 -0.2 -0.4 +0.4 +0.3
in planta Plant=Sorghum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days -0.2 +0.2 +0.5 -0.3 -0.1
nitrogen source DL-2-Aminobutyric (N) -0.2 +0.6 +0.7 +0.0 -0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.3 +0.4 +0.1 -0.3 +0.4
nophagecontrol No phage control +0.3 +0.5 +0.2 -0.1 +0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days +0.2 +0.4 +0.3 +0.3 +0.2
stress Pyrogallol 0.5 mM +0.3 +0.5 -0.0 +0.3 +0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days -0.0 +0.4 +0.4 +0.4 +0.2
in planta Plant=Tomato; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.0 +0.6 +0.6 +0.3 -0.1
in planta Plant=Sorghum_SS_20; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.2 +0.5 +0.5 +0.1 +0.2
in planta Plant=Lettuce; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=3days +0.3 +0.2 +0.7 -0.0 +0.4
lb LB +0.3 +0.4 +0.4 +0.3 +0.2
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.2 +0.3 +0.5 +0.4 +0.2
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.1 +0.4 +0.4 +0.5 +0.2
lb_sorghum_leaf LB_sorghum_leaf +0.2 +0.3 +0.5 +0.3 +0.2
in planta Plant=Sorghum_NK_430; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct +0.3 +0.2 +0.4 +0.3 +0.4
in planta Plant=Sorghum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +0.5 +0.3 +0.1 +0.4 +0.3
nophagecontrol No phage control +0.2 +0.3 +0.6 +0.2 +0.4
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 +0.2 +0.4 +0.5 +0.2
phage AgroPhage_B01 +0.4 +0.5 +0.2 +0.4 +0.3
lb_arabidopsis_leaf LB_arabidopsis_leaf +0.3 +0.5 +0.6 +0.3 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.5 +0.4 +0.8 +0.3 -0.0
in planta Plant=Sorghum_X50_665; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct -0.0 -0.0 +1.3 +0.3 +0.4
in planta Plant=Arabidopsis_col0; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=5days +0.3 +0.5 +0.6 +0.4 +0.1
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.6 +0.3 +0.6 +0.4 +0.2
in planta Plant=Ntabacum; PlantTreatment=None; Sample=root; GrowthSubstrate=agar; Collection=Direct +1.0 +0.5 +1.4 +0.0 -0.3
in planta Plant=Ntabacum; PlantTreatment=None; Sample=leaf; GrowthSubstrate=agar; Collection=Direct; Time=7days +0.4 +0.4 +0.7 +0.5 +0.6
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